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Identifier: 16519792

GI number: 16519792

Start: 402391

End: 402849

Strand: Reverse

Name: Not Available

Synonym: NGR_a03140

Alternate gene names: NA

Gene position: 402849-402391 (Counterclockwise)

Preceding gene: 16519781

Following gene: 16519793

Centisome position: 75.14

GC content: 62.09

Gene sequence:

>459_bases
ATGGACGAGCGGAACGATAGTGCCAGGTCTGAAGCCATGTTTGAAGCCAGGCACGAAGGGCGGTATCGCCGTGTTGAGGT
GATCACGGGGCCAGTCCGCCGACGGAACTGGACGGACGAGGAGAAGGCTCTGATGCTCGCGGAAAGCGCTGAGCCGGATG
CGAACATCTCTGCCATTGCCCGGCGCTTTGGCGTCAATCGCGGCCTTTTGAACACGTGGCGGCGGGCGGCAGGCCAAATT
GGCCCGGTTTTGGGAGAGCCCGCGCTGGAGCAACCCGCTTTCGTTCCGATCAGGATCGCTGACGATCAGAATGAGCATCA
AGCTGATGAAGCAGGTATCGCCGAAGGCGCCGCCGGTCGGATCGAGATCGAGCTTGGCGGTGGGCGGATGATCGTGACAG
GCAATGTCTCTCCCGACTTGGCGCATGCTGTGGTGATGGCGCTGCGGGGTAGACGGTGA

Upstream 100 bases:

>100_bases
CTTCGTCGTTAGTGCACCGTGAGCGTCACGAACGCCCCACCTTTTATCGGCGTGATTTAGGCCTGAGATTCGGCTCTTTG
ATTTGGAAGGGCTGTTTTGA

Downstream 100 bases:

>100_bases
TCGGGCCATCGAGGGGGCTGAGGATCATGGTGGCGACCCAGCCGGTCGATTTCCGGCGTGGCATGAACGGGCTCGTCGCA
CTGGTGGGGTCGGCCCTTTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDERNDSARSEAMFEARHEGRYRRVEVITGPVRRRNWTDEEKALMLAESAEPDANISAIARRFGVNRGLLNTWRRAAGQI
GPVLGEPALEQPAFVPIRIADDQNEHQADEAGIAEGAAGRIEIELGGGRMIVTGNVSPDLAHAVVMALRGRR

Sequences:

>Translated_152_residues
MDERNDSARSEAMFEARHEGRYRRVEVITGPVRRRNWTDEEKALMLAESAEPDANISAIARRFGVNRGLLNTWRRAAGQI
GPVLGEPALEQPAFVPIRIADDQNEHQADEAGIAEGAAGRIEIELGGGRMIVTGNVSPDLAHAVVMALRGRR
>Mature_152_residues
MDERNDSARSEAMFEARHEGRYRRVEVITGPVRRRNWTDEEKALMLAESAEPDANISAIARRFGVNRGLLNTWRRAAGQI
GPVLGEPALEQPAFVPIRIADDQNEHQADEAGIAEGAAGRIEIELGGGRMIVTGNVSPDLAHAVVMALRGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4JB_RHISN (P55502)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443912.1
- GeneID:   962335
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03140
- HOGENOM:   HBG756815
- ProtClustDB:   CLSK886511
- InterPro:   IPR009057
- InterPro:   IPR002514

Pfam domain/function: PF01527 Transposase_8; SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 16693; Mature: 16693

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERNDSARSEAMFEARHEGRYRRVEVITGPVRRRNWTDEEKALMLAESAEPDANISAIA
CCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHCCCCCCHHHEEEEECCCCCCCCHHHHH
RRFGVNRGLLNTWRRAAGQIGPVLGEPALEQPAFVPIRIADDQNEHQADEAGIAEGAAGR
HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCE
IEIELGGGRMIVTGNVSPDLAHAVVMALRGRR
EEEEECCCEEEEECCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDERNDSARSEAMFEARHEGRYRRVEVITGPVRRRNWTDEEKALMLAESAEPDANISAIA
CCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHCCCCCCHHHEEEEECCCCCCCCHHHHH
RRFGVNRGLLNTWRRAAGQIGPVLGEPALEQPAFVPIRIADDQNEHQADEAGIAEGAAGR
HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCE
IEIELGGGRMIVTGNVSPDLAHAVVMALRGRR
EEEEECCCEEEEECCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424