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Identifier: 16519781

GI number: 16519781

Start: 416333

End: 417052

Strand: Reverse

Name: Not Available

Synonym: NGR_a03250

Alternate gene names: NA

Gene position: 417052-416333 (Counterclockwise)

Preceding gene: 16519773

Following gene: 16519792

Centisome position: 77.78

GC content: 54.17

Gene sequence:

>720_bases
ATGAAAACTATGGTTGCAATGCTTCTTGCAGCGGTTGGCGTTGCAGTCAGTGCCAGCAGCACTTTGGCGGTTAATTTCTG
CCAGTCCAACAAAGACCGGAATTGCTTTACCGGCAGTTTCGGACTTGTCGACATTCCCGGTGACGCAAGCCATAAGCTGC
TCAAGGCAGATTTCGGATATGTCGATTTGAACGGAGTGGGTTGGCAGACCAACAAGGAGACGAAGACTGACGGCGCTTCG
ATTCCGCCGCTATTGCAACCGTTTGTCGGTTCCCCATGGGAAGACGGCTATATTCGTGCAGCCGTCATCCATGACTGGTA
CTGCGACAGACACGTTCGAACTTGGAAAGAGACGCATCGCGTCTTCTATGACACCATGCTGGCCAGCGGCTTGGAGAAAC
CGAAAGCGAAATTGCTGTTCTACGCCGTCTATGCCTTTGGTCCACGCTGGGGCTATCTCGTTCCCGGAGAGAAGTGTGCG
GCTGGGAAGAACTGCATCCAGATGACAGGAAAGGACGCCGCGTTCGTGCAGTTGCCTGGGGAATTGGCCGATCAGTCGAG
CGCAGGCGAATTGAAGGCGATCAAGGCGACCATCGATCTCAAGGAGCGTTCTGGTGATGCGTTAACGCTTGATGAACTTA
TGGCGATCGCCGACGAAGCTCACCCCAAGCAAACACTTCGTGATCAGCGGCCTGCCGGTGGTGATGAGATCACCAAGTAA

Upstream 100 bases:

>100_bases
CGAGCCGCGCAATCTTCATGGAGCGAGTTTATCCGATACCATTTAGCGTTGATTGTAGACGCAAAGTTGCTAATCTCGCG
TTCAAATGGAAGGGGCTTTT

Downstream 100 bases:

>100_bases
CGGTGCAAGTCGTCGATGGAGGACGCGAGGAAGAGGGACCGTCTTTCAAGACCGACAGCACTATACGATCTTGAGAAGCA
GATTCATCGCTTCAACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKTMVAMLLAAVGVAVSASSTLAVNFCQSNKDRNCFTGSFGLVDIPGDASHKLLKADFGYVDLNGVGWQTNKETKTDGAS
IPPLLQPFVGSPWEDGYIRAAVIHDWYCDRHVRTWKETHRVFYDTMLASGLEKPKAKLLFYAVYAFGPRWGYLVPGEKCA
AGKNCIQMTGKDAAFVQLPGELADQSSAGELKAIKATIDLKERSGDALTLDELMAIADEAHPKQTLRDQRPAGGDEITK

Sequences:

>Translated_239_residues
MKTMVAMLLAAVGVAVSASSTLAVNFCQSNKDRNCFTGSFGLVDIPGDASHKLLKADFGYVDLNGVGWQTNKETKTDGAS
IPPLLQPFVGSPWEDGYIRAAVIHDWYCDRHVRTWKETHRVFYDTMLASGLEKPKAKLLFYAVYAFGPRWGYLVPGEKCA
AGKNCIQMTGKDAAFVQLPGELADQSSAGELKAIKATIDLKERSGDALTLDELMAIADEAHPKQTLRDQRPAGGDEITK
>Mature_239_residues
MKTMVAMLLAAVGVAVSASSTLAVNFCQSNKDRNCFTGSFGLVDIPGDASHKLLKADFGYVDLNGVGWQTNKETKTDGAS
IPPLLQPFVGSPWEDGYIRAAVIHDWYCDRHVRTWKETHRVFYDTMLASGLEKPKAKLLFYAVYAFGPRWGYLVPGEKCA
AGKNCIQMTGKDAAFVQLPGELADQSSAGELKAIKATIDLKERSGDALTLDELMAIADEAHPKQTLRDQRPAGGDEITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4IH_RHISN (P55491)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443901.1
- GeneID:   962562
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03250
- ProtClustDB:   CLSK893857
- InterPro:   IPR010767

Pfam domain/function: PF07087 DUF1353

EC number: NA

Molecular weight: Translated: 26031; Mature: 26031

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMVAMLLAAVGVAVSASSTLAVNFCQSNKDRNCFTGSFGLVDIPGDASHKLLKADFGY
CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCEEECCCCCCCCEEECCCCE
VDLNGVGWQTNKETKTDGASIPPLLQPFVGSPWEDGYIRAAVIHDWYCDRHVRTWKETHR
EEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHH
VFYDTMLASGLEKPKAKLLFYAVYAFGPRWGYLVPGEKCAAGKNCIQMTGKDAAFVQLPG
HHHHHHHHHCCCCCHHHEEEEEEEHHCCCCCEECCCCHHHCCCCCEEECCCCEEEEECCH
ELADQSSAGELKAIKATIDLKERSGDALTLDELMAIADEAHPKQTLRDQRPAGGDEITK
HHCCCCCCCCEEEEEEEEEECCCCCCEECHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTMVAMLLAAVGVAVSASSTLAVNFCQSNKDRNCFTGSFGLVDIPGDASHKLLKADFGY
CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCEEECCCCCCCCEEECCCCE
VDLNGVGWQTNKETKTDGASIPPLLQPFVGSPWEDGYIRAAVIHDWYCDRHVRTWKETHR
EEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHH
VFYDTMLASGLEKPKAKLLFYAVYAFGPRWGYLVPGEKCAAGKNCIQMTGKDAAFVQLPG
HHHHHHHHHCCCCCHHHEEEEEEEHHCCCCCEECCCCHHHCCCCCEEECCCCEEEEECCH
ELADQSSAGELKAIKATIDLKERSGDALTLDELMAIADEAHPKQTLRDQRPAGGDEITK
HHCCCCCCCCEEEEEEEEEECCCCCCEECHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424