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Identifier: 16519772

GI number: 16519772

Start: 426009

End: 427667

Strand: Reverse

Name: Not Available

Synonym: NGR_a03340

Alternate gene names: NA

Gene position: 427667-426009 (Counterclockwise)

Preceding gene: 16519771

Following gene: 16519773

Centisome position: 79.76

GC content: 61.0

Gene sequence:

>1659_bases
ATGATCTCAAAGCCTGTCGATCTTCCTGTGGATGTTGTTGGCGCTTACCTGGCGCTGCGTGGCGAGCATGAAGCCTTGCA
GGCTAAACACGCTATCGCAGTAGCGGAAGCCGCCAATGCGCAGGCGATGCTCTCTGACAACGAGGCGCTGATCGTTGCTC
TGGAATTGAAGATCGAGAAGCTCAGGCGCGAGTTGCGGGGCCAGCGCTCTGAGCGCACGGCGCGCCTGCTCGACCAGTTG
GAACTGCAGCTCGAGGAACTCGTGGCGGCGGCGACGGAGGATGAGGTCGCGGCACAAGCAGCAAGCGCCAGAACCTCGAG
CGTACGTTCGTTCACGCGCAAACGGCCGGTGCGCAAACCATGGCCGGACGATATCGAGCGCGAACGTGTTGTCATCGAGC
CGCCGACGACTTGCACCTGCTGTGGTGGTTCGCGCCTGTCGAAGCTGGGCGAGGACGTCACCGAGACGCTGGAAGAGATC
CCACGCCGGTTCAAAGTGATCGAGACGGTGCGGGAAAAGTTCACCTGCCGCGACTGTGAGGCGATCAGTCAGACGCCCGC
ACCCTTCCATGCCACGCCGCGCGGCTTTATCGGGCCGAACCTGCTGGCGACGATCCTGTTCGACAAGTTCGGCATGCACA
GCCCGCTCAACCGGCAGAGTGCCCGGTTCAAATGCGAGGGGATCGATCTTTCGACCTCGACGCTGGCCGACCAGGTCGGG
TACGCAACAGCCGCTCTCATGCCTGTCTTCGATCTGATCGAGGCGCATGTCTTCGCGGCCGAGCGTCTTCACGGTGATGA
CACCACCATTCCCATTCAGGCCAGGGACAAATGCACGACCGGACGCATATGGACTTACGTATGCGATGACCGGCCATTCG
GGGGAACGGCGCCGCCAGCCGCAATCTATTATGCGTCGAGTGACCGGCGCGGCGAACATCCGCAGAAACACCTGGCCGGA
TACGGCGGCATTCTGCAGAGCGATTGCTACAATGGCTTCGAGCCGATCGCTGTTGCCGCAACGAAAGCGGTCCCGATCAC
ATTCGCCTTTTGTCACGCGCATGCGCGGCGGAAATTCTTTGAGCTGGCCGATATCCAGAAGAATGCGCGGGATCGCAAAC
GGAGGGGCAAGCCGATCTCGCCGATCGCATTGGAAGCCGTCAAGCGCTACGACGAATTGTTCGAGATCGAGCGCCAGATC
AACGGATTGAGCGCCGAAGAACGACTGGCTGTGCGGCAGGAGAAGAGCAAGCCACTGTTCGATGACATGCACGAGTGGTT
GACGAAGGAACGCGCCATGCTCAGCAGATCGTCCGAGGTCATCGAGCCGATCGATTACATGCTCAAGCGCTGGGAGGGCT
TTGCTCTCTTCCTCAAAGACGGGAGAGTTTGTTTAACGAACAACGCAGCCGAGCGGGCGCTGAGAAGTGTCGCATTGGGA
AGACGGAACTGGACCTTCGCCGGTTCTCAGCGCGGGGCCGATCGTGCCGCTGTCATGCTGACCGTCATCACCACCTGCCG
CCTCAACGATATCGACCCGAAGGCATGGCTTGCAGACGTGCTGGCTCGCATCGCCGACCATCCTGTCACGCGCCTGTACG
AACTGCTGCCCTGGGAGTGGAAACGTGCATCGGCGGCAACCGTCATGCTGGCGGCCTGA

Upstream 100 bases:

>100_bases
CGGAATCGACTGGAGGCATCCTCAGGAAACCTGGCGGCCGACGAAGGTCGGCTAGCATTATTCTATTGAAAATACAGGGG
AAATCTGATCGAATGGCTTC

Downstream 100 bases:

>100_bases
CGATGGTGGCTTCCGTCGTCCGCCTGAAGGTCACCCTCGATCATGTCGAGCCGATAGTGATGCGGCGCGTTGTCGTGCCG
TTCACCATCAGGCTCAGTCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MISKPVDLPVDVVGAYLALRGEHEALQAKHAIAVAEAANAQAMLSDNEALIVALELKIEKLRRELRGQRSERTARLLDQL
ELQLEELVAAATEDEVAAQAASARTSSVRSFTRKRPVRKPWPDDIERERVVIEPPTTCTCCGGSRLSKLGEDVTETLEEI
PRRFKVIETVREKFTCRDCEAISQTPAPFHATPRGFIGPNLLATILFDKFGMHSPLNRQSARFKCEGIDLSTSTLADQVG
YATAALMPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPAAIYYASSDRRGEHPQKHLAG
YGGILQSDCYNGFEPIAVAATKAVPITFAFCHAHARRKFFELADIQKNARDRKRRGKPISPIALEAVKRYDELFEIERQI
NGLSAEERLAVRQEKSKPLFDDMHEWLTKERAMLSRSSEVIEPIDYMLKRWEGFALFLKDGRVCLTNNAAERALRSVALG
RRNWTFAGSQRGADRAAVMLTVITTCRLNDIDPKAWLADVLARIADHPVTRLYELLPWEWKRASAATVMLAA

Sequences:

>Translated_552_residues
MISKPVDLPVDVVGAYLALRGEHEALQAKHAIAVAEAANAQAMLSDNEALIVALELKIEKLRRELRGQRSERTARLLDQL
ELQLEELVAAATEDEVAAQAASARTSSVRSFTRKRPVRKPWPDDIERERVVIEPPTTCTCCGGSRLSKLGEDVTETLEEI
PRRFKVIETVREKFTCRDCEAISQTPAPFHATPRGFIGPNLLATILFDKFGMHSPLNRQSARFKCEGIDLSTSTLADQVG
YATAALMPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPAAIYYASSDRRGEHPQKHLAG
YGGILQSDCYNGFEPIAVAATKAVPITFAFCHAHARRKFFELADIQKNARDRKRRGKPISPIALEAVKRYDELFEIERQI
NGLSAEERLAVRQEKSKPLFDDMHEWLTKERAMLSRSSEVIEPIDYMLKRWEGFALFLKDGRVCLTNNAAERALRSVALG
RRNWTFAGSQRGADRAAVMLTVITTCRLNDIDPKAWLADVLARIADHPVTRLYELLPWEWKRASAATVMLAA
>Mature_552_residues
MISKPVDLPVDVVGAYLALRGEHEALQAKHAIAVAEAANAQAMLSDNEALIVALELKIEKLRRELRGQRSERTARLLDQL
ELQLEELVAAATEDEVAAQAASARTSSVRSFTRKRPVRKPWPDDIERERVVIEPPTTCTCCGGSRLSKLGEDVTETLEEI
PRRFKVIETVREKFTCRDCEAISQTPAPFHATPRGFIGPNLLATILFDKFGMHSPLNRQSARFKCEGIDLSTSTLADQVG
YATAALMPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPAAIYYASSDRRGEHPQKHLAG
YGGILQSDCYNGFEPIAVAATKAVPITFAFCHAHARRKFFELADIQKNARDRKRRGKPISPIALEAVKRYDELFEIERQI
NGLSAEERLAVRQEKSKPLFDDMHEWLTKERAMLSRSSEVIEPIDYMLKRWEGFALFLKDGRVCLTNNAAERALRSVALG
RRNWTFAGSQRGADRAAVMLTVITTCRLNDIDPKAWLADVLARIADHPVTRLYELLPWEWKRASAATVMLAA

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4HP_RHISN (P50360)

Other databases:

- EMBL:   X74068
- EMBL:   U00090
- PIR:   T10850
- RefSeq:   NP_443892.1
- RefSeq:   YP_002826289.1
- GeneID:   7791051
- GeneID:   962321
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03340
- HOGENOM:   HBG741435
- ProtClustDB:   CLSK2484865
- InterPro:   IPR004291

Pfam domain/function: PF03050 Transposase_25

EC number: NA

Molecular weight: Translated: 61748; Mature: 61748

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKPVDLPVDVVGAYLALRGEHEALQAKHAIAVAEAANAQAMLSDNEALIVALELKIEK
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHHHHHH
LRRELRGQRSERTARLLDQLELQLEELVAAATEDEVAAQAASARTSSVRSFTRKRPVRKP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WPDDIERERVVIEPPTTCTCCGGSRLSKLGEDVTETLEEIPRRFKVIETVREKFTCRDCE
CCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AISQTPAPFHATPRGFIGPNLLATILFDKFGMHSPLNRQSARFKCEGIDLSTSTLADQVG
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
YATAALMPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCC
AIYYASSDRRGEHPQKHLAGYGGILQSDCYNGFEPIAVAATKAVPITFAFCHAHARRKFF
EEEEECCCCCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHECCCCHHHHHHHHHHHHHHHH
ELADIQKNARDRKRRGKPISPIALEAVKRYDELFEIERQINGLSAEERLAVRQEKSKPLF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
DDMHEWLTKERAMLSRSSEVIEPIDYMLKRWEGFALFLKDGRVCLTNNAAERALRSVALG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHHHHHHHC
RRNWTFAGSQRGADRAAVMLTVITTCRLNDIDPKAWLADVLARIADHPVTRLYELLPWEW
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCC
KRASAATVMLAA
CCCCCCEEEEEC
>Mature Secondary Structure
MISKPVDLPVDVVGAYLALRGEHEALQAKHAIAVAEAANAQAMLSDNEALIVALELKIEK
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHHHHHH
LRRELRGQRSERTARLLDQLELQLEELVAAATEDEVAAQAASARTSSVRSFTRKRPVRKP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WPDDIERERVVIEPPTTCTCCGGSRLSKLGEDVTETLEEIPRRFKVIETVREKFTCRDCE
CCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AISQTPAPFHATPRGFIGPNLLATILFDKFGMHSPLNRQSARFKCEGIDLSTSTLADQVG
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
YATAALMPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCC
AIYYASSDRRGEHPQKHLAGYGGILQSDCYNGFEPIAVAATKAVPITFAFCHAHARRKFF
EEEEECCCCCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHECCCCHHHHHHHHHHHHHHHH
ELADIQKNARDRKRRGKPISPIALEAVKRYDELFEIERQINGLSAEERLAVRQEKSKPLF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
DDMHEWLTKERAMLSRSSEVIEPIDYMLKRWEGFALFLKDGRVCLTNNAAERALRSVALG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHHHHHHHC
RRNWTFAGSQRGADRAAVMLTVITTCRLNDIDPKAWLADVLARIADHPVTRLYELLPWEW
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCC
KRASAATVMLAA
CCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424