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Identifier: 16519771

GI number: 16519771

Start: 427713

End: 428060

Strand: Reverse

Name: Not Available

Synonym: NGR_a03350

Alternate gene names: NA

Gene position: 428060-427713 (Counterclockwise)

Preceding gene: 16519770

Following gene: 16519772

Centisome position: 79.84

GC content: 57.18

Gene sequence:

>348_bases
ATGCTTCCTTCCGGTCAAAATGTGCGGGTGTGGATTGCAACGGGCCATACGGACATGCGGTGTGGGTTTCCATCGCTTGC
GTTGCGGGTGCAGGAGGTGCTGAAACTGAACCCTTTGGACGGCAATCTTTTTGTGTTTCGCGGTCGCAGCGGATCGCTGC
TAAAAGTGATCTGGAGTGACGGCCAGGGGAGCTGCCTTTTTACAAAAAGATTGGACCGTGGCCGGTTCGTCTGGCCTTCT
GCCGAAGGCGGAGCGATAGCGATATCACCCGCGCAGCTCAGTTATCTTCTGTCCGGAATCGACTGGAGGCATCCTCAGGA
AACCTGGCGGCCGACGAAGGTCGGCTAG

Upstream 100 bases:

>100_bases
AGATTGTTGCGGCGAACGGCCGTCGTGTGGTCGTGGACGGCAGCGTCGACGTTGAGGCGCTGCTGCGGATCATGCGGGGG
CTGGAGACGTTGCGGTGATC

Downstream 100 bases:

>100_bases
CATTATTCTATTGAAAATACAGGGGAAATCTGATCGAATGGCTTCATGATCTCAAAGCCTGTCGATCTTCCTGTGGATGT
TGTTGGCGCTTACCTGGCGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLPSGQNVRVWIATGHTDMRCGFPSLALRVQEVLKLNPLDGNLFVFRGRSGSLLKVIWSDGQGSCLFTKRLDRGRFVWPS
AEGGAIAISPAQLSYLLSGIDWRHPQETWRPTKVG

Sequences:

>Translated_115_residues
MLPSGQNVRVWIATGHTDMRCGFPSLALRVQEVLKLNPLDGNLFVFRGRSGSLLKVIWSDGQGSCLFTKRLDRGRFVWPS
AEGGAIAISPAQLSYLLSGIDWRHPQETWRPTKVG
>Mature_115_residues
MLPSGQNVRVWIATGHTDMRCGFPSLALRVQEVLKLNPLDGNLFVFRGRSGSLLKVIWSDGQGSCLFTKRLDRGRFVWPS
AEGGAIAISPAQLSYLLSGIDWRHPQETWRPTKVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4HO_RHISN (P50359)

Other databases:

- EMBL:   X74068
- EMBL:   U00090
- PIR:   S34667
- PIR:   T10849
- RefSeq:   NP_443891.1
- GeneID:   962633
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03350
- HOGENOM:   HBG702448
- ProtClustDB:   CLSK809000
- InterPro:   IPR008878

Pfam domain/function: PF05717 Transposase_34

EC number: NA

Molecular weight: Translated: 12779; Mature: 12779

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSGQNVRVWIATGHTDMRCGFPSLALRVQEVLKLNPLDGNLFVFRGRSGSLLKVIWSD
CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEC
GQGSCLFTKRLDRGRFVWPSAEGGAIAISPAQLSYLLSGIDWRHPQETWRPTKVG
CCCCEEEEEECCCCEEECCCCCCCEEEECHHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLPSGQNVRVWIATGHTDMRCGFPSLALRVQEVLKLNPLDGNLFVFRGRSGSLLKVIWSD
CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEC
GQGSCLFTKRLDRGRFVWPSAEGGAIAISPAQLSYLLSGIDWRHPQETWRPTKVG
CCCCEEEEEECCCCEEECCCCCCCEEEECHHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424