Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519703

GI number: 16519703

Start: 520122

End: 520310

Strand: Reverse

Name: Not Available

Synonym: NGR_a04030

Alternate gene names: NA

Gene position: 520310-520122 (Counterclockwise)

Preceding gene: 16519702

Following gene: 16519709

Centisome position: 97.04

GC content: 57.14

Gene sequence:

>189_bases
GTGGAGCGAAAGCGACTCGACGCGGAGGATCTCGTCGCCCGCATCACTTGGCAGGCGTTAAGCAAATGCCTTGTTGGAGA
GATGTATGTGAATGCGGCGCGCGAGACGTTTTTCCGCACGGCGAAAAACAAGGGCCTCCTTGCCGAACCGGAGATGTCAT
TGAGCTCAGTTGGCCGGTTGGCTAAGTGA

Upstream 100 bases:

>100_bases
CGGAGGTCATGATGCGGGGATCCTTTAACGACCTGGTCTATGCGCAAAATGGCCGCACTCTCGTGAAGGAAATCTGTTCC
GTGAGCAAGCGATCGTCTTC

Downstream 100 bases:

>100_bases
CTGAGCTTCCGCTTCCAGGAACGCGGACGGCACGTGCCTTGGAGCGGGCTCATCCACGCCTGGTCGATCAAGATCGTTTA
CGACAGCACTGGAGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRLAK

Sequences:

>Translated_62_residues
MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRLAK
>Mature_62_residues
MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRLAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4DN_RHISN (P55413)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443823.1
- GeneID:   962340
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a04030

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7001; Mature: 7001

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC
AK
CC
>Mature Secondary Structure
MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC
AK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424