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Identifier: 16519699

GI number: 16519699

Start: 523513

End: 523746

Strand: Reverse

Name: Not Available

Synonym: NGR_a04070

Alternate gene names: NA

Gene position: 523746-523513 (Counterclockwise)

Preceding gene: 16519697

Following gene: 16519701

Centisome position: 97.68

GC content: 56.41

Gene sequence:

>234_bases
ATGGATATGCGCAAGCTGGTCGGCTCTAATTTCGCCCGCCTGCGTCGGGAGAAGGGCCTGACACAGGAAGAGGTCGAAGC
TCGTTCCGGTTTCAGCCAACAATATCTGAGCAGCCTTGAGCGCGGGCGACGCAACCCTACCGTGATTACTCTTTATGAGC
TGGCTCAAGCCTTGGGTGTAAGTCACGTCGAGTTGGTTACCCCGACTGATGAGACTCCGTTTGGCACGCGATGA

Upstream 100 bases:

>100_bases
CATTTAAACAACTGCTTCGAGCCGACGGGCGTTCCGAGCCGCCGCGTTTACATACTTTAGTTGATAAACTTATGGTGTGT
AAACGACGATCTTTCAGCGC

Downstream 100 bases:

>100_bases
GGCGAATAATCCTACTGCAGGGTAAAATCGAGCGTATGCGCCGCTTACATCCCATTGATTTCGCGTGTTTGTGAACATTG
TGATTCTGCCAGAAGGTTTT

Product: uncharacterized transcription regulator, XRE family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MDMRKLVGSNFARLRREKGLTQEEVEARSGFSQQYLSSLERGRRNPTVITLYELAQALGVSHVELVTPTDETPFGTR

Sequences:

>Translated_77_residues
MDMRKLVGSNFARLRREKGLTQEEVEARSGFSQQYLSSLERGRRNPTVITLYELAQALGVSHVELVTPTDETPFGTR
>Mature_77_residues
MDMRKLVGSNFARLRREKGLTQEEVEARSGFSQQYLSSLERGRRNPTVITLYELAQALGVSHVELVTPTDETPFGTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4DJ_RHISN (P55409)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443819.1
- ProteinModelPortal:   P55409
- SMR:   P55409
- GeneID:   962294
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a04070
- HOGENOM:   HBG727458
- ProtClustDB:   CLSK864382
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 8726; Mature: 8726

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRKLVGSNFARLRREKGLTQEEVEARSGFSQQYLSSLERGRRNPTVITLYELAQALGV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
SHVELVTPTDETPFGTR
CCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDMRKLVGSNFARLRREKGLTQEEVEARSGFSQQYLSSLERGRRNPTVITLYELAQALGV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
SHVELVTPTDETPFGTR
CCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424