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The map label for this gene is spsA

Identifier: 16519701

GI number: 16519701

Start: 521904

End: 522494

Strand: Reverse

Name: spsA

Synonym: NGR_a04050

Alternate gene names: NA

Gene position: 522494-521904 (Counterclockwise)

Preceding gene: 16519699

Following gene: 16519702

Centisome position: 97.45

GC content: 59.73

Gene sequence:

>591_bases
ATGGCATATAAAACGGAGCATATAACGCAGCAGCTGCGCGCTGCGCGCGAAGCGCAGAAAATGAGCCAGCGCGAGCTGAG
CGCACGATCGGGCCTGACGCAAAGCCATATTTCTCAGATAGAACGGGGCACCATGGAGCCCGGACTTGGCAGCCTAGTGG
ATGTGGCGCGCGCGCTCGACCTCGAGATAGTCCTTGCCCCGAAAAAACTGATGCCAGCAATCCGCAATATCCTCGATAGT
GCATCGGCATCGAGTGATGTCCTGACATCCGACCAGCGCAAACTGGTGGGGCGCCTTGAGCGGTGGTTTGCGCAGCACAG
GGGCGGGTTCGGTAGTGCTTCCGAGGCAGATACATTCAAAGATAGCCTCGCGCTCTTACGGCATCTTCCTCTGTCGGCCG
AGGAGATGGACACATTCAACGAGGCGACTGCACGCCTCGACCGGTCGCAGGCTGATCCTCCATCCCGTCAGGAACTGAGC
AGGATCGCACATGCCGTAAGACACCTACGCAACGCCGCGGTGCACCGCGACCGTGACGACGCGGTCCCTCGCTCGGCCTA
TGCGCTGGATGAGGAAGACGATAATGCCTAA

Upstream 100 bases:

>100_bases
TCAGCGTTTTGATACGGTTTTGTATATCGACATTGCATTGCTCTCTAACTCCCTATATATTATCCTGTATGGTTCGCATC
CTGCGATACAGGATAATGAT

Downstream 100 bases:

>100_bases
GGTCACGGTACTCGATGTCAGGCTGTATGGGGAACCGGTTTCGACCCTGACGAATCTGCAGGACGGGCGCACCATCTTCG
CGTTCAACGAGGCTTATATC

Product: transcription regulator; symbiotic plasmid stability locus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAYKTEHITQQLRAAREAQKMSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVARALDLEIVLAPKKLMPAIRNILDS
ASASSDVLTSDQRKLVGRLERWFAQHRGGFGSASEADTFKDSLALLRHLPLSAEEMDTFNEATARLDRSQADPPSRQELS
RIAHAVRHLRNAAVHRDRDDAVPRSAYALDEEDDNA

Sequences:

>Translated_196_residues
MAYKTEHITQQLRAAREAQKMSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVARALDLEIVLAPKKLMPAIRNILDS
ASASSDVLTSDQRKLVGRLERWFAQHRGGFGSASEADTFKDSLALLRHLPLSAEEMDTFNEATARLDRSQADPPSRQELS
RIAHAVRHLRNAAVHRDRDDAVPRSAYALDEEDDNA
>Mature_195_residues
AYKTEHITQQLRAAREAQKMSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVARALDLEIVLAPKKLMPAIRNILDSA
SASSDVLTSDQRKLVGRLERWFAQHRGGFGSASEADTFKDSLALLRHLPLSAEEMDTFNEATARLDRSQADPPSRQELSR
IAHAVRHLRNAAVHRDRDDAVPRSAYALDEEDDNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4DL_RHISN (P55411)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443821.1
- ProteinModelPortal:   P55411
- SMR:   P55411
- GeneID:   962180
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a04050
- HOGENOM:   HBG655399
- ProtClustDB:   CLSK516079
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 21765; Mature: 21633

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKTEHITQQLRAAREAQKMSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVARALD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
LEIVLAPKKLMPAIRNILDSASASSDVLTSDQRKLVGRLERWFAQHRGGFGSASEADTFK
HHHEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
DSLALLRHLPLSAEEMDTFNEATARLDRSQADPPSRQELSRIAHAVRHLRNAAVHRDRDD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AVPRSAYALDEEDDNA
CCCCHHHCCCCCCCCC
>Mature Secondary Structure 
AYKTEHITQQLRAAREAQKMSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVARALD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
LEIVLAPKKLMPAIRNILDSASASSDVLTSDQRKLVGRLERWFAQHRGGFGSASEADTFK
HHHEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
DSLALLRHLPLSAEEMDTFNEATARLDRSQADPPSRQELSRIAHAVRHLRNAAVHRDRDD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AVPRSAYALDEEDDNA
CCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424