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The map label for this gene is trbI

Identifier: 16519696

GI number: 16519696

Start: 525304

End: 526599

Strand: Reverse

Name: trbI

Synonym: NGR_a04100

Alternate gene names: 16519696

Gene position: 526599-525304 (Counterclockwise)

Preceding gene: 16519695

Following gene: 16519697

Centisome position: 98.22

GC content: 59.8

Gene sequence:

>1296_bases
ATGGTCCAGTCTCTGCGGCTTGGTGCCGCCAACGAGGCCGAAGATCAGAACGGCATGCGCCGTCTCAATCGCCTGCCGAT
CATCGTCGCCATCGTCATCGTTGCGCTGTTCGTCGGCTTCGTCGTCATCGGACTGGCATGGCGCGGTCTTCCGTTCAACC
GCAACAATGATATCCACAGCGCATCGAATACCCCGGCAACGAATTTCGGCGACCAGCTCAAGCGCGGCGTCACCGACGGT
ATCATCGGCGAGCCGGTGAAACGGGAAGCGTTTCAGCCGACGCCCACCATGAAACAGAAGGTCGACAAGGAACCGACTGT
CGTCGACCGGCCTACGGAACCGGAAGAGCGACGCCCGCGGCTCGAAACCGAGGAAGAATGGAAGGCGCGCCTGATGCGCG
AGCAGGACGAACAAATTATCCGCGAGGCCCAGCGGCAGCGGATGGCCCGGCTGCAGGCACGAGCAACGGCTTTGGACTCG
CCGTTGAAGGTGGATATTTCCGAAGGCGAGAAAGCACCCAAGAACTCCACGGACACGGGTCAAAATCCCACGGCGACAGA
AAACAATGCCTCGGACCTCTACCCCGCCGCCATGAAATCGGGGATCATGGGCGAGAACCTCGATCCGAACGCCCAGGCGT
CGAAGGAGGATTTCTTCAACCAGGACATCAAGGATGATGGCTACCTCCCAAATCGGGTCGTGCCGCAGATGTCGGTCTAT
GAGTTGAAGCGCGGCTCGGTCATTCCCGCCACCTTGATCACCGGCCTCAATTCCGACCTCCCGGGTCGCATCACAGCGCA
GGTCAGCCAGAATGTCTATGACAGCGCCACCGGCTACCGGTTGCTTATCCCGCAGGGCGCCAAACTGTTCGGGCGCTATG
ACTCAAAGGTCTCGTTTGGCCAGGAGCGCGTTCTCGTCGTCTGGACCGATCTCATTTTCCCAAATGGATCGACCCTGCAG
ATTGGCGGTATGGCTGGCACGGACGCCGAGGGCTATGGTGGCTTCAAGGACAGGGTCGACCGGCATCTCTGGCGCACTTG
GAGTTCGGCAGCGCTGATCGCGCTGATTGGGACCGGAATCGACATGTCGATGCCCGAGAGCTCGACGCTGGCGACACAGG
ATACTGCCTCAGACGCCGTACGCCGAAACTTCGCTGAATCGTTCGGCCGGGTGGCTGAGCAGACCATATCGAAGAACCTG
AACGTCCAGCCAACAATCCGCATCCGACCCGGCTATAAGTTCAATGTCCTCGTTGACCAGGACATCATCTTTCCGTCCGC
CTATCGTGACAATTAG

Upstream 100 bases:

>100_bases
CGCCCTCTATCGCGCTTGGCCGGGCCTACACGGCAACGGCAGCGGGTGCTGTGCCGGCAAGTCCGCTTTCCATCATGCAG
CGCAACTGACGGAGACAGAT

Downstream 100 bases:

>100_bases
CGGCGCAGGGCCCACAGATCTGATCTCCGTATCTGCCGCTGGTTGGCGCGCGGTGTGGCGCTACAATCACTGCAGCGCAA
AACCTTTCCTCACTTGTACT

Product: conjugal transfer protein TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MVQSLRLGAANEAEDQNGMRRLNRLPIIVAIVIVALFVGFVVIGLAWRGLPFNRNNDIHSASNTPATNFGDQLKRGVTDG
IIGEPVKREAFQPTPTMKQKVDKEPTVVDRPTEPEERRPRLETEEEWKARLMREQDEQIIREAQRQRMARLQARATALDS
PLKVDISEGEKAPKNSTDTGQNPTATENNASDLYPAAMKSGIMGENLDPNAQASKEDFFNQDIKDDGYLPNRVVPQMSVY
ELKRGSVIPATLITGLNSDLPGRITAQVSQNVYDSATGYRLLIPQGAKLFGRYDSKVSFGQERVLVVWTDLIFPNGSTLQ
IGGMAGTDAEGYGGFKDRVDRHLWRTWSSAALIALIGTGIDMSMPESSTLATQDTASDAVRRNFAESFGRVAEQTISKNL
NVQPTIRIRPGYKFNVLVDQDIIFPSAYRDN

Sequences:

>Translated_431_residues
MVQSLRLGAANEAEDQNGMRRLNRLPIIVAIVIVALFVGFVVIGLAWRGLPFNRNNDIHSASNTPATNFGDQLKRGVTDG
IIGEPVKREAFQPTPTMKQKVDKEPTVVDRPTEPEERRPRLETEEEWKARLMREQDEQIIREAQRQRMARLQARATALDS
PLKVDISEGEKAPKNSTDTGQNPTATENNASDLYPAAMKSGIMGENLDPNAQASKEDFFNQDIKDDGYLPNRVVPQMSVY
ELKRGSVIPATLITGLNSDLPGRITAQVSQNVYDSATGYRLLIPQGAKLFGRYDSKVSFGQERVLVVWTDLIFPNGSTLQ
IGGMAGTDAEGYGGFKDRVDRHLWRTWSSAALIALIGTGIDMSMPESSTLATQDTASDAVRRNFAESFGRVAEQTISKNL
NVQPTIRIRPGYKFNVLVDQDIIFPSAYRDN
>Mature_431_residues
MVQSLRLGAANEAEDQNGMRRLNRLPIIVAIVIVALFVGFVVIGLAWRGLPFNRNNDIHSASNTPATNFGDQLKRGVTDG
IIGEPVKREAFQPTPTMKQKVDKEPTVVDRPTEPEERRPRLETEEEWKARLMREQDEQIIREAQRQRMARLQARATALDS
PLKVDISEGEKAPKNSTDTGQNPTATENNASDLYPAAMKSGIMGENLDPNAQASKEDFFNQDIKDDGYLPNRVVPQMSVY
ELKRGSVIPATLITGLNSDLPGRITAQVSQNVYDSATGYRLLIPQGAKLFGRYDSKVSFGQERVLVVWTDLIFPNGSTLQ
IGGMAGTDAEGYGGFKDRVDRHLWRTWSSAALIALIGTGIDMSMPESSTLATQDTASDAVRRNFAESFGRVAEQTISKNL
NVQPTIRIRPGYKFNVLVDQDIIFPSAYRDN

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRBI_RHISN (P55406)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443816.1
- ProteinModelPortal:   P55406
- SMR:   P55406
- GeneID:   962289
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a04100
- HOGENOM:   HBG519631
- ProtClustDB:   PRK13831
- GO:   GO:0000746
- InterPro:   IPR005498

Pfam domain/function: PF03743 TrbI

EC number: NA

Molecular weight: Translated: 47769; Mature: 47769

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x403b3c04)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSLRLGAANEAEDQNGMRRLNRLPIIVAIVIVALFVGFVVIGLAWRGLPFNRNNDIHS
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ASNTPATNFGDQLKRGVTDGIIGEPVKREAFQPTPTMKQKVDKEPTVVDRPTEPEERRPR
CCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCC
LETEEEWKARLMREQDEQIIREAQRQRMARLQARATALDSPLKVDISEGEKAPKNSTDTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
QNPTATENNASDLYPAAMKSGIMGENLDPNAQASKEDFFNQDIKDDGYLPNRVVPQMSVY
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
ELKRGSVIPATLITGLNSDLPGRITAQVSQNVYDSATGYRLLIPQGAKLFGRYDSKVSFG
HHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCC
QERVLVVWTDLIFPNGSTLQIGGMAGTDAEGYGGFKDRVDRHLWRTWSSAALIALIGTGI
CCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCC
DMSMPESSTLATQDTASDAVRRNFAESFGRVAEQTISKNLNVQPTIRIRPGYKFNVLVDQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECC
DIIFPSAYRDN
CEECCCCCCCH
>Mature Secondary Structure
MVQSLRLGAANEAEDQNGMRRLNRLPIIVAIVIVALFVGFVVIGLAWRGLPFNRNNDIHS
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ASNTPATNFGDQLKRGVTDGIIGEPVKREAFQPTPTMKQKVDKEPTVVDRPTEPEERRPR
CCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCC
LETEEEWKARLMREQDEQIIREAQRQRMARLQARATALDSPLKVDISEGEKAPKNSTDTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
QNPTATENNASDLYPAAMKSGIMGENLDPNAQASKEDFFNQDIKDDGYLPNRVVPQMSVY
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
ELKRGSVIPATLITGLNSDLPGRITAQVSQNVYDSATGYRLLIPQGAKLFGRYDSKVSFG
HHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCC
QERVLVVWTDLIFPNGSTLQIGGMAGTDAEGYGGFKDRVDRHLWRTWSSAALIALIGTGI
CCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCC
DMSMPESSTLATQDTASDAVRRNFAESFGRVAEQTISKNLNVQPTIRIRPGYKFNVLVDQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECC
DIIFPSAYRDN
CEECCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424