Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
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Accession | NC_000907 |
Length | 1,830,138 |
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The map label for this gene is uxuA [H]
Identifier: 16272029
GI number: 16272029
Start: 55607
End: 56791
Strand: Direct
Name: uxuA [H]
Synonym: HI0055
Alternate gene names: 16272029
Gene position: 55607-56791 (Clockwise)
Preceding gene: 30995351
Following gene: 16272036
Centisome position: 3.04
GC content: 37.97
Gene sequence:
>1185_bases ATGGAACAAGCATGGCGTTGGTATGGACCAAAAGATCCTGTTTCTTTATCTGATATTCGTCAAGCAGGCGCAACTGGTAT AGTCACTGCACTTCACCATATTCCTAACGGTGAAATATGGGGTATTGAAGAAATTAAAAAACGCAAAACTGAAATAGAAA ATGCTGGTTTAAGCTGGTCAGTAGTGGAAAGTGTACCAGTTCATGAAGAGATTAAAACTCAGACTGGAAATTATCAAAAA TGGATTAATAACTACAAACAAACTCTTCGCAATCTTGCTCAATGTGGAATTGACACTGTTTGCTACAATTTTATGCCAGT TTTAGACTGGACTCGAACCGATCTTGCTTATGAATTACCAGATGGTTCTAAAGCATTGCGCTTTGATCATATCGCTTTTG CCGCATTTGAACTTCATATTTTAAAACGTCCTGATGCAGAAAAAACCTATAATCAAGAAGAACAAGTTGCAGCAAGAACC TATTATGACAATATGTCAGAGCAAGATATAGCGCAATTAACGCGTAATATTATTGCGGGCTTACCCGGTGCAGAAGAAGG TTACACTCTTGATGAATTTCAAACTCAATTAGATCGCTATAAAGATATTTCATCCGAAAAATTCCGTACGCATTTGGCTT ATTTTTTAAATGAGATCGTACCTGTTGCCCAAGAAATAGGAATCAAAATGGCGATTCATCCAGACGATCCTCCACGCCCA ATCTTAGGCTTACCACGCATAGTTTCAACTATTGAAGATATGCAATGGTTTGTAGAAACTCAACCATTACCAGCAAATGG TTTTACAATGTGTACGGGTTCTTATGGCGTACGTTCCGATAATGATCTCGTAAAAATGACTGAACAATTCGCTGATCGTA TTTACTTCGCTCATTTACGTTCTACTCAACGTGAAGGTAATCCACTAACCTTCCATGAGGCAGCTCATCTAGAGGGAGAC GTAGATATGTTTAATGTAGTAAAAGCTTTATTAAATGAAGAATATCGTCGATTAAATCAAGGAGAAACGCGTTTAATCCC AATGCGCCCAGATCATGGGCATCAAATATTGGATGACTTACGTAAAAAAACCAACCCTGGCTACTCTGCTATTGGTCGGT TAAAAGGTCTAGCTGAATTTCGCGGTTTAGAGATGGCATTAAAAAAAGTGTATTTCAATAAGTAA
Upstream 100 bases:
>100_bases ATTATCTGATGTAGAAGATCCACATTTTGATGGATACCTATTCAATACAAATCCAGTTGTTGTAGGTATCTAAATACTTG TAATAACATAGGAGTTAAAA
Downstream 100 bases:
>100_bases AAGAAAAAGTGCGGTCATAAAAAACATTATTTTTATCGACCGCACTTCTAATTTATTTCATCAATCTTCTCATTCGAATA TTGATCATCTCGACCACAAC
Product: mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MEQAWRWYGPKDPVSLSDIRQAGATGIVTALHHIPNGEIWGIEEIKKRKTEIENAGLSWSVVESVPVHEEIKTQTGNYQK WINNYKQTLRNLAQCGIDTVCYNFMPVLDWTRTDLAYELPDGSKALRFDHIAFAAFELHILKRPDAEKTYNQEEQVAART YYDNMSEQDIAQLTRNIIAGLPGAEEGYTLDEFQTQLDRYKDISSEKFRTHLAYFLNEIVPVAQEIGIKMAIHPDDPPRP ILGLPRIVSTIEDMQWFVETQPLPANGFTMCTGSYGVRSDNDLVKMTEQFADRIYFAHLRSTQREGNPLTFHEAAHLEGD VDMFNVVKALLNEEYRRLNQGETRLIPMRPDHGHQILDDLRKKTNPGYSAIGRLKGLAEFRGLEMALKKVYFNK
Sequences:
>Translated_394_residues MEQAWRWYGPKDPVSLSDIRQAGATGIVTALHHIPNGEIWGIEEIKKRKTEIENAGLSWSVVESVPVHEEIKTQTGNYQK WINNYKQTLRNLAQCGIDTVCYNFMPVLDWTRTDLAYELPDGSKALRFDHIAFAAFELHILKRPDAEKTYNQEEQVAART YYDNMSEQDIAQLTRNIIAGLPGAEEGYTLDEFQTQLDRYKDISSEKFRTHLAYFLNEIVPVAQEIGIKMAIHPDDPPRP ILGLPRIVSTIEDMQWFVETQPLPANGFTMCTGSYGVRSDNDLVKMTEQFADRIYFAHLRSTQREGNPLTFHEAAHLEGD VDMFNVVKALLNEEYRRLNQGETRLIPMRPDHGHQILDDLRKKTNPGYSAIGRLKGLAEFRGLEMALKKVYFNK >Mature_394_residues MEQAWRWYGPKDPVSLSDIRQAGATGIVTALHHIPNGEIWGIEEIKKRKTEIENAGLSWSVVESVPVHEEIKTQTGNYQK WINNYKQTLRNLAQCGIDTVCYNFMPVLDWTRTDLAYELPDGSKALRFDHIAFAAFELHILKRPDAEKTYNQEEQVAART YYDNMSEQDIAQLTRNIIAGLPGAEEGYTLDEFQTQLDRYKDISSEKFRTHLAYFLNEIVPVAQEIGIKMAIHPDDPPRP ILGLPRIVSTIEDMQWFVETQPLPANGFTMCTGSYGVRSDNDLVKMTEQFADRIYFAHLRSTQREGNPLTFHEAAHLEGD VDMFNVVKALLNEEYRRLNQGETRLIPMRPDHGHQILDDLRKKTNPGYSAIGRLKGLAEFRGLEMALKKVYFNK
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=394, Percent_Identity=72.8426395939086, Blast_Score=625, Evalue=1e-180,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 45206; Mature: 45206
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAWRWYGPKDPVSLSDIRQAGATGIVTALHHIPNGEIWGIEEIKKRKTEIENAGLSWS CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCEE VVESVPVHEEIKTQTGNYQKWINNYKQTLRNLAQCGIDTVCYNFMPVLDWTRTDLAYELP HHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEECC DGSKALRFDHIAFAAFELHILKRPDAEKTYNQEEQVAARTYYDNMSEQDIAQLTRNIIAG CCCCHHHHHHHHHHHHHEEEECCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC LPGAEEGYTLDEFQTQLDRYKDISSEKFRTHLAYFLNEIVPVAQEIGIKMAIHPDDPPRP CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC ILGLPRIVSTIEDMQWFVETQPLPANGFTMCTGSYGVRSDNDLVKMTEQFADRIYFAHLR CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH STQREGNPLTFHEAAHLEGDVDMFNVVKALLNEEYRRLNQGETRLIPMRPDHGHQILDDL HHCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH RKKTNPGYSAIGRLKGLAEFRGLEMALKKVYFNK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQAWRWYGPKDPVSLSDIRQAGATGIVTALHHIPNGEIWGIEEIKKRKTEIENAGLSWS CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCEE VVESVPVHEEIKTQTGNYQKWINNYKQTLRNLAQCGIDTVCYNFMPVLDWTRTDLAYELP HHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEECC DGSKALRFDHIAFAAFELHILKRPDAEKTYNQEEQVAARTYYDNMSEQDIAQLTRNIIAG CCCCHHHHHHHHHHHHHEEEECCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC LPGAEEGYTLDEFQTQLDRYKDISSEKFRTHLAYFLNEIVPVAQEIGIKMAIHPDDPPRP CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC ILGLPRIVSTIEDMQWFVETQPLPANGFTMCTGSYGVRSDNDLVKMTEQFADRIYFAHLR CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH STQREGNPLTFHEAAHLEGDVDMFNVVKALLNEEYRRLNQGETRLIPMRPDHGHQILDDL HHCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH RKKTNPGYSAIGRLKGLAEFRGLEMALKKVYFNK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA