Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is msrA [H]
Identifier: 162149389
GI number: 162149389
Start: 3703038
End: 3703742
Strand: Direct
Name: msrA [H]
Synonym: GDI_3623
Alternate gene names: 162149389
Gene position: 3703038-3703742 (Clockwise)
Preceding gene: 162149388
Following gene: 162149391
Centisome position: 93.89
GC content: 65.96
Gene sequence:
>705_bases ATGACACGGTCAGGACTACTCGGCATCTCGCTCATTGCCATGGGGGCGCTCGGCACGGCGTGCCATGCCGCGGACGCGCC GCTCGCCACGCGTCTGCCGCCGCCGGCAGCCGCCGAAGCGCCCGCGACGACCCATCGTGCCACCGCCGTCTTCGCCGGAG GATGTTTCTGGGGCGTCCAGAGTGTCTTCCAGCACATACGCGGCGTGACCGCGACGCGCGCGGGATATGACGGCGGAACG AAGGACACCGCCGAATACGAGACCGTCAGCGGCGGCGATACGGGGCACGCGGAATCGGTCGCGGTCGAATACGACCCGAC GCAGGTCGGTTACGGCACGCTGATGCAGATCTTCTTCTCGGTCGCACTGGACCCTACGCAGGTGAACAGGCAATTTCCGG ATGTCGGCAGCCAGTATCGCTCCGCCCTGTTCACCCGCACGCCGGAGCAGGCGACGGCGGCGCGCGCCTATATCCGGCAG CTGAATGCCGCGCATGTCTTCGCGCGCCCGATCGCAACGCAGATCGTTCCGGATCATGGCTTCTATCCGGCCGAGGAGTA TCACCAGAATTTCGCGGCCCGCCATCCGGAAGATTCCTACATCGCAACGTATGACGCCCCTCGGATCGAGGCGCTGAAGA TGGTATACGGCGCACAGTATCGCGATGACCCGATCCTGACGCTTGCCGCGCCCGGCGGACCGTAA
Upstream 100 bases:
>100_bases CTCCGCTCCGGTGCTCGGGAACACACGCCGGGCGCGGCCTATCGGGCCGCTCTCGCTCACCAGCTCACATTTTCGGTCAG GCTCTGAGAGGACCAAAACC
Downstream 100 bases:
>100_bases GGGCGGGGGCGGCAGCAACAGGAGCAAGAGTGACGGAAGCCGAATGGAGTCACTGGATGGCGGCCGCCCAGCAGGGCGAC GCCAATGCCTATCGGCTTGT
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTRSGLLGISLIAMGALGTACHAADAPLATRLPPPAAAEAPATTHRATAVFAGGCFWGVQSVFQHIRGVTATRAGYDGGT KDTAEYETVSGGDTGHAESVAVEYDPTQVGYGTLMQIFFSVALDPTQVNRQFPDVGSQYRSALFTRTPEQATAARAYIRQ LNAAHVFARPIATQIVPDHGFYPAEEYHQNFAARHPEDSYIATYDAPRIEALKMVYGAQYRDDPILTLAAPGGP
Sequences:
>Translated_234_residues MTRSGLLGISLIAMGALGTACHAADAPLATRLPPPAAAEAPATTHRATAVFAGGCFWGVQSVFQHIRGVTATRAGYDGGT KDTAEYETVSGGDTGHAESVAVEYDPTQVGYGTLMQIFFSVALDPTQVNRQFPDVGSQYRSALFTRTPEQATAARAYIRQ LNAAHVFARPIATQIVPDHGFYPAEEYHQNFAARHPEDSYIATYDAPRIEALKMVYGAQYRDDPILTLAAPGGP >Mature_233_residues TRSGLLGISLIAMGALGTACHAADAPLATRLPPPAAAEAPATTHRATAVFAGGCFWGVQSVFQHIRGVTATRAGYDGGTK DTAEYETVSGGDTGHAESVAVEYDPTQVGYGTLMQIFFSVALDPTQVNRQFPDVGSQYRSALFTRTPEQATAARAYIRQL NAAHVFARPIATQIVPDHGFYPAEEYHQNFAARHPEDSYIATYDAPRIEALKMVYGAQYRDDPILTLAAPGGP
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=151, Percent_Identity=38.4105960264901, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI208609995, Length=151, Percent_Identity=38.4105960264901, Blast_Score=104, Evalue=6e-23, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=38.3177570093458, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1790665, Length=151, Percent_Identity=45.6953642384106, Blast_Score=125, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320881, Length=155, Percent_Identity=35.4838709677419, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI24664627, Length=168, Percent_Identity=31.547619047619, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24664631, Length=168, Percent_Identity=30.952380952381, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45553131, Length=149, Percent_Identity=32.2147651006711, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 24976; Mature: 24845
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSGLLGISLIAMGALGTACHAADAPLATRLPPPAAAEAPATTHRATAVFAGGCFWGVQ CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEEECHHHHHHH SVFQHIRGVTATRAGYDGGTKDTAEYETVSGGDTGHAESVAVEYDPTQVGYGTLMQIFFS HHHHHHCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH VALDPTQVNRQFPDVGSQYRSALFTRTPEQATAARAYIRQLNAAHVFARPIATQIVPDHG HHCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FYPAEEYHQNFAARHPEDSYIATYDAPRIEALKMVYGAQYRDDPILTLAAPGGP CCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCC >Mature Secondary Structure TRSGLLGISLIAMGALGTACHAADAPLATRLPPPAAAEAPATTHRATAVFAGGCFWGVQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEEECHHHHHHH SVFQHIRGVTATRAGYDGGTKDTAEYETVSGGDTGHAESVAVEYDPTQVGYGTLMQIFFS HHHHHHCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH VALDPTQVNRQFPDVGSQYRSALFTRTPEQATAARAYIRQLNAAHVFARPIATQIVPDHG HHCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FYPAEEYHQNFAARHPEDSYIATYDAPRIEALKMVYGAQYRDDPILTLAAPGGP CCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]