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The map label for this gene is msrB [H]

Identifier: 162149388

GI number: 162149388

Start: 3702395

End: 3702859

Strand: Direct

Name: msrB [H]

Synonym: GDI_3622

Alternate gene names: 162149388

Gene position: 3702395-3702859 (Clockwise)

Preceding gene: 162149382

Following gene: 162149389

Centisome position: 93.87

GC content: 71.4

Gene sequence:

>465_bases
ATGACCTCCCGCCGCCAGTTCTGCCTTGCCTCGGCCGCGTTCCTGCTGGCCGCGCGCCCCGGCCGCGCCGCGCCGCCCTA
TGCCGTCTCGCATTCGGATGCGGAATGGCGCCGCCTGCTGACGCCCGCGCAATACGACGTCCTGCGCCGGGCCGGCACGG
AAATGCCGTGGTCCAGCCCCCTTCTGGGCGAGCATCGACCTGGCCGCTTCGCCTGCGCCGGGTGCGATACCGCCGCGTTC
GACGCCGGCACCAAATTCGAAAGCGGCACCGGCTGGCCGAGTTTCTACCGCGCCCTGCCGCATGCCGTGCAGGAACGCGC
CGACCATTCGCTCGGCATGGATCGGACCGAGGTGCTGTGCGCCACCTGCGGCGGCCATCTCGGCCATGTTTTCGACGACG
GCCCGCCGCCTACGGGCCTGCGCTACTGCATGAACGGCGTCGCCCTGTCCTTCCACCCGGCCTGA

Upstream 100 bases:

>100_bases
GTTACAGGCTTGCGCAAAAAGATAGTCCGCCGCCGCTCGTAACCAATGGCCCCGGCACGCCGAAGAACCGGACATCCTGT
CATCGTGAAGGAGCGGTTCC

Downstream 100 bases:

>100_bases
GAGCCTGACCGAAAATGCGCGCTGGCGGCGATCCGACGCGCGTTTCCTGCGCTCCGGTGCTCACGGCCATCAAGGCCGCT
CCGCTCCGGTGCTCGGGAAC

Product: peptide methionine sulfoxide reductase msrB

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTSRRQFCLASAAFLLAARPGRAAPPYAVSHSDAEWRRLLTPAQYDVLRRAGTEMPWSSPLLGEHRPGRFACAGCDTAAF
DAGTKFESGTGWPSFYRALPHAVQERADHSLGMDRTEVLCATCGGHLGHVFDDGPPPTGLRYCMNGVALSFHPA

Sequences:

>Translated_154_residues
MTSRRQFCLASAAFLLAARPGRAAPPYAVSHSDAEWRRLLTPAQYDVLRRAGTEMPWSSPLLGEHRPGRFACAGCDTAAF
DAGTKFESGTGWPSFYRALPHAVQERADHSLGMDRTEVLCATCGGHLGHVFDDGPPPTGLRYCMNGVALSFHPA
>Mature_153_residues
TSRRQFCLASAAFLLAARPGRAAPPYAVSHSDAEWRRLLTPAQYDVLRRAGTEMPWSSPLLGEHRPGRFACAGCDTAAFD
AGTKFESGTGWPSFYRALPHAVQERADHSLGMDRTEVLCATCGGHLGHVFDDGPPPTGLRYCMNGVALSFHPA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=127, Percent_Identity=48.0314960629921, Blast_Score=124, Evalue=3e-29,
Organism=Homo sapiens, GI301336162, Length=127, Percent_Identity=48.0314960629921, Blast_Score=124, Evalue=3e-29,
Organism=Homo sapiens, GI73089054, Length=127, Percent_Identity=48.0314960629921, Blast_Score=124, Evalue=3e-29,
Organism=Homo sapiens, GI37620216, Length=127, Percent_Identity=48.0314960629921, Blast_Score=124, Evalue=5e-29,
Organism=Homo sapiens, GI117606353, Length=130, Percent_Identity=45.3846153846154, Blast_Score=117, Evalue=4e-27,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=43.801652892562, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17553450, Length=123, Percent_Identity=40.650406504065, Blast_Score=101, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI115532676, Length=123, Percent_Identity=40.650406504065, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319816, Length=127, Percent_Identity=37.7952755905512, Blast_Score=91, Evalue=6e-20,
Organism=Drosophila melanogaster, GI221378664, Length=125, Percent_Identity=42.4, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI221378662, Length=132, Percent_Identity=38.6363636363636, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24645799, Length=125, Percent_Identity=41.6, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45553335, Length=125, Percent_Identity=41.6, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21356369, Length=125, Percent_Identity=41.6, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24645801, Length=136, Percent_Identity=38.2352941176471, Blast_Score=99, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24645804, Length=136, Percent_Identity=38.2352941176471, Blast_Score=99, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16661; Mature: 16530

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRQFCLASAAFLLAARPGRAAPPYAVSHSDAEWRRLLTPAQYDVLRRAGTEMPWSSP
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCC
LLGEHRPGRFACAGCDTAAFDAGTKFESGTGWPSFYRALPHAVQERADHSLGMDRTEVLC
CCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ATCGGHLGHVFDDGPPPTGLRYCMNGVALSFHPA
HHHCCCCCCCCCCCCCCHHHHHHHHCCEEEECCC
>Mature Secondary Structure 
TSRRQFCLASAAFLLAARPGRAAPPYAVSHSDAEWRRLLTPAQYDVLRRAGTEMPWSSP
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCC
LLGEHRPGRFACAGCDTAAFDAGTKFESGTGWPSFYRALPHAVQERADHSLGMDRTEVLC
CCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ATCGGHLGHVFDDGPPPTGLRYCMNGVALSFHPA
HHHCCCCCCCCCCCCCCHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA