Click here to switch to the map view.

The map label for this gene is yaaJ [C]

Identifier: 161870868

GI number: 161870868

Start: 2007161

End: 2008588

Strand: Direct

Name: yaaJ [C]

Synonym: NMCC_1956

Alternate gene names: 161870868

Gene position: 2007161-2008588 (Clockwise)

Preceding gene: 161870864

Following gene: 161870869

Centisome position: 93.21

GC content: 55.53

Gene sequence:

>1428_bases
ATGAACGAGAACTTTACCGAATGGCTGCACGGCTGGGTCGGCGCCATCAACGATCCGATGTGGTCATACTTGGTTTATAT
GCTTTTGGGTACGGGGCTTTTCTTCACCGTAACCACGGGCTTTGTCCAATTCCGCCTGTTCGGGCGCAGCATCAAAGAAA
TGCTCGGCGGCCGCAAACAGGGGGACGACCCTCACGGCATCACGCCGTTTCAGGCATTTGTAACCGGCCTTGCCAGCCGC
GTGGGCGTGGGCAATATCGCGGGCGTGGCAATCGCCATCAAAGTCGGCGGGCCGGGCGCGGTGTTTTGGATGTGGGTAAC
CGCCTTAATCGGTATGAGTTCGGCGTTTGTCGAATCTTCGCTGGCGCAGCTCTTTAAAGTCCGCGACTACGACAACCACC
ATTTCCGGGGCGGCCCTGCCTACTACATCACTCAAGGGCTGGGGCAGAAATGGCTGGGCGTGTTGTTCGCCCTGAGCCTG
ATTTTCTGTTTCGGCTTTGTGTTTGAAGCGGTTCAGACCAATACCATTGCCGATACCGTCAAAGCGGCGTGGGGTTGGGA
GCCTCATTATGTCGGCGTCGCCCTGGTGATTTTAACCGCGCCGATTATCTTCGGCGGCATCAGGCGCATATCTAAAGCGG
CGGAAATCGTCGTCCCCCTGATGGCGGTTTTGTACCTCTTTATCGCGCTTTTCATCATTTTGACCAATATTCCGATGATT
CCGGACGTGTTCGGTCAGATTTTTTCGGGCGCGTTCAAATTCGACGCGGCAGCAGGCGGCTTACTCGGCGGTCTGATTTC
GCAAACGATGATGATGGGCATCAAACGCAGCCTGTATTCCAACGAGGCGGGTATGGGTTCCGCGCCGAACGCCGCCGCCG
CCGCCGAAGTGAAACACCCTGTTTCGCAAGGTATGATTCAAATGCTGGGCGTGTTTGTCGATACCATCATCGTTTGTTCT
TGCACCGCCTTCATCATCTTGATTTACCAACAGCCTTACGGCGATTTGAGCGGTGCGGCGCTGACGCAGGCGGCGATTGT
CAGCCAAGTGGGGCAATGGGGCGCGGGCTTCCTCGCCGTCATCCTGTTTATGTTTGCCTTTTCCACCGTTATCGGCAACT
ATGCCTATGCCGAGTCCAACGTCCAATTCATCAAAAGCCATTGGCTGATTACCGCCGTTTTCCGTATGCTGGTTTTGGCG
TGGGTCTATTTCGGCGCGGTTGCCAATGTGCCTTTGGTCTGGGATATGGCGGATATGGCGATGGGCATTATGGCGTGGAT
CAACCTTGTCGCCATCCTGCTGCTCTCGCCCTTGGCGTTTATGCTGCTGCGCGATTACACCGCCAAGCTGAAAATGGGCA
AAGACCCCGAGTTCAAACTTTCCGAACATCCGGGCCTGAAACGCCGTATCAAATCCGACGTTTGGTAA

Upstream 100 bases:

>100_bases
TTCTGATTTTGTTGACAATCTGCTAGAATGGGCGTTTACAAAATTTAAACCCTGCTTGCATACCGCCAATATGTGCGAGT
TTCAACTTTAAGGAAGCGAT

Downstream 100 bases:

>100_bases
ATCCCGCCCTTACCGGAGCCGCTTCCCCGCGAAGCGGCTTTTCCCTTTCCGCACACTGTAAAAACAGGGCGAACAAGCGT
ACAATCCCAACCCTTTACTT

Product: amino-acid transport protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQFRLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASR
VGVGNIAGVAIAIKVGGPGAVFWMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVVPLMAVLYLFIALFIILTNIPMI
PDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKRSLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCS
CTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLA
WVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVW

Sequences:

>Translated_475_residues
MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQFRLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASR
VGVGNIAGVAIAIKVGGPGAVFWMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVVPLMAVLYLFIALFIILTNIPMI
PDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKRSLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCS
CTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLA
WVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVW
>Mature_475_residues
MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQFRLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASR
VGVGNIAGVAIAIKVGGPGAVFWMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVVPLMAVLYLFIALFIILTNIPMI
PDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKRSLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCS
CTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLA
WVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVW

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=473, Percent_Identity=42.4947145877378, Blast_Score=357, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 51823; Mature: 51823

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQFRLFGRSIKEMLGGRKQ
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVFWMWVTALIGMSSAFVESS
CCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHH
LAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSLIFCFGFVFEAVQTNTIADTV
HHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVVPLMAVLYLFIALFIILTNIPMI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKRSLYSNEAGMGSAPNAAAAAEVKHP
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
ILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMADMA
HHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHH
MGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]