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The map label for this gene is ybgK [C]

Identifier: 161870833

GI number: 161870833

Start: 1963044

End: 1963973

Strand: Direct

Name: ybgK [C]

Synonym: NMCC_1915

Alternate gene names: 161870833

Gene position: 1963044-1963973 (Clockwise)

Preceding gene: 161870832

Following gene: 161870834

Centisome position: 91.16

GC content: 56.67

Gene sequence:

>930_bases
ATGATTCACGTTTCGGCAGTGCAGGCACCGGCGCATATTCAGGATACCGGACGCTACGGACACCGGCGTTACGGCATCGG
TCATGCCGGTGCGATGGACACGGTTGCTTTGGCGGCGGGTAATATTTTATTGGGCAACGACGAAGGCACGGCCGCAATCG
AAATCGCTTTGGGCGGGATAATGCTGGTGTTTGAACGGGATACGCCGTTTTGTCTCACCGGTGCCGTGTATCAGGCGGAA
TTGGACGGCGAACCGGTCTATTCGTATTGGCGTTATACCGCCCGCAAAGGGCAGACCTTGAAAATGGTGCGTGCCGTGCA
GGGCATGTACGGCTATGTGTGCGTGGCGGGCGGATTTGATGTGCCGGAAGTGATGGGTTCGAGAAGCACCGACCTGAAAG
CCGGTTTCGGCGGCCATCAAGGCAGAATGCTGCAAAAAGGTGATTGTCTCCCCATCGGCAAAGGTGCGCAGGAATTGTCC
AAAGTCGGCATTGCCCCGATACCGTTTACCGATACCGTCCACCTTGTTCCTTCGTCGGAATATGCCGCTTTCAGTGAAAA
AGGGCGTCTGAATCTGGAACGGGAAACGTGGACGCTGCAAAGCGATAGCAACCGCATGGGCTACCGCTTCGACGGACAGC
CGCTGACCCTGTCGCAACCTTTGGAAATGCTGTCCCACGCTGTTCAGGCAGGAACCGTGCAGGTGCCGCCCGGCGGCAAA
CCGATTATCCTGCTGGCCGATGCGCAAACCACCGGCGGTTATCCGAAAATCGCTACCGTTGCCGCCGCCGATTTGGGCAG
GCTGGCACAGGTGCGCTTCGGCAGCAAAGTCAAATTCAAAATAATCGGCTTGAAAGAAGCCACCGCCCTGCGGCGCAAAA
ACCAAGTCTATCTGAACCAAATACGGAGAATCACCCATGAAGCAGGTTGA

Upstream 100 bases:

>100_bases
TCGGCAGAACCGAATTACCCTTGTTCCGAGCCGATTTGAATCCGCCGACCCTGCTGGCGGCGGGTGACCAAGTCCGCTTT
GTTGCAGAAAGGATTGAGCC

Downstream 100 bases:

>100_bases
TTTAAACGCCGATCTCGCCGAAGGCTGCGGCAGCGACGAAGCCTTGTTGCAGCTGATTACTTCGGCCAACATCGCCTGCG
CCCAACACGCCGGCAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILLGNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAE
LDGEPVYSYWRYTARKGQTLKMVRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLSQPLEMLSHAVQAGTVQVPPGGK
PIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSKVKFKIIGLKEATALRRKNQVYLNQIRRITHEAG

Sequences:

>Translated_309_residues
MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILLGNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAE
LDGEPVYSYWRYTARKGQTLKMVRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLSQPLEMLSHAVQAGTVQVPPGGK
PIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSKVKFKIIGLKEATALRRKNQVYLNQIRRITHEAG
>Mature_309_residues
MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILLGNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAE
LDGEPVYSYWRYTARKGQTLKMVRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLSQPLEMLSHAVQAGTVQVPPGGK
PIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSKVKFKIIGLKEATALRRKNQVYLNQIRRITHEAG

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=296, Percent_Identity=44.5945945945946, Blast_Score=252, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6319685, Length=332, Percent_Identity=26.2048192771084, Blast_Score=117, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 33276; Mature: 33276

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILLGNDEGTAAIEIALGGI
CEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHEEECCEEEECCCCCEEEEEEECEE
MLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKMVRAVQGMYGYVCVAGGFD
EEEEECCCCEEEECEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCC
VPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELSKVGIAPIPFTDTVHLVPSSE
HHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCC
YAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLSQPLEMLSHAVQAGTVQVPPGGK
HHHHCCCCCEEEEEEEEEEECCCCCCCEEECCCCEEHHHHHHHHHHHHHCCEEEECCCCC
PIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSKVKFKIIGLKEATALRRKNQVYLNQ
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHCCHHHHHH
IRRITHEAG
HHHHHHCCC
>Mature Secondary Structure
MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILLGNDEGTAAIEIALGGI
CEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHEEECCEEEECCCCCEEEEEEECEE
MLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKMVRAVQGMYGYVCVAGGFD
EEEEECCCCEEEECEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCC
VPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELSKVGIAPIPFTDTVHLVPSSE
HHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCC
YAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLSQPLEMLSHAVQAGTVQVPPGGK
HHHHCCCCCEEEEEEEEEEECCCCCCCEEECCCCEEHHHHHHHHHHHHHCCEEEECCCCC
PIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSKVKFKIIGLKEATALRRKNQVYLNQ
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHCCHHHHHH
IRRITHEAG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]