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The map label for this gene is ybgJ [C]

Identifier: 161870832

GI number: 161870832

Start: 1962400

End: 1963047

Strand: Direct

Name: ybgJ [C]

Synonym: NMCC_1914

Alternate gene names: 161870832

Gene position: 1962400-1963047 (Clockwise)

Preceding gene: 161870831

Following gene: 161870833

Centisome position: 91.13

GC content: 56.94

Gene sequence:

>648_bases
ATGAGAATAGAGATCACACCAATCAGCGAATCCGCTTTGGTCTGCCGACTGAATGCACCTTCCGAACTGGGCAAACAGCA
AAAGTTGTGGGCGTTTGCCGCTGCGCTCGGGCAGCACGACAGGATTGAGGAAGTGGTGGTCGGCATGAACAATCTGACCG
TGTTCACCCGTTTCGATACCGATTTGGCGACGCTTGCCGATGAATTGCAATATGTGTGGGAACACACCGCCGTTACAGAC
CATCAGGGCAAACTGGTGGAAATTCCCGTCTGCTACGGCGGCGAATACGGCCCGGATTTGGCGGAAGTCGCTGCTTTCCA
TCAGACGGTTATTTCCGAAATCGTCCGCCGCCATACGGCGCAAACTTATACCGTATTTATGATGGGCTTCCAGCCTGGTT
TCCCTTATCTGGGCGGCTTGCCCGAAGCATTGCACACGCCCCGCCGTGCCGTGCCGAGAACGTCCGTTCCTGCCGGTTCG
GTCGGTATCGGCGGCAGTCAGACCGGTGTGTATCCGTTCGCTTCGCCCGGCGGCTGGCAGATTATCGGCAGAACCGAATT
ACCCTTGTTCCGAGCCGATTTGAATCCGCCGACCCTGCTGGCGGCGGGTGACCAAGTCCGCTTTGTTGCAGAAAGGATTG
AGCCATGA

Upstream 100 bases:

>100_bases
ACTTTTCCAATCGACGGTTTGATGATGCAGCACAGAAGATATTGACAAACCGCCGCCCCTGCATATAGATTCATTAAAAC
ATAACCAAAATGAACAACAA

Downstream 100 bases:

>100_bases
TTCACGTTTCGGCAGTGCAGGCACCGGCGCATATTCAGGATACCGGACGCTACGGACACCGGCGTTACGGCATCGGTCAT
GCCGGTGCGATGGACACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEEVVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTD
HQGKLVEIPVCYGGEYGPDLAEVAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP

Sequences:

>Translated_215_residues
MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEEVVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTD
HQGKLVEIPVCYGGEYGPDLAEVAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP
>Mature_215_residues
MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEEVVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTD
HQGKLVEIPVCYGGEYGPDLAEVAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=206, Percent_Identity=50.9708737864078, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 23500; Mature: 23500

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEEVVVGMNNLTVFTRFDT
CEEEEEECCCCEEEEEECCCHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECC
DLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAEVAAFHQTVISEIVRRHTA
HHHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
QTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGSVGIGGSQTGVYPFASPGGWQ
CEEEEEEEECCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
IIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP
EEECCCCCEEEECCCCCEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEEVVVGMNNLTVFTRFDT
CEEEEEECCCCEEEEEECCCHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECC
DLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAEVAAFHQTVISEIVRRHTA
HHHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
QTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGSVGIGGSQTGVYPFASPGGWQ
CEEEEEEEECCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
IIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP
EEECCCCCEEEECCCCCEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]