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The map label for this gene is 161870825

Identifier: 161870825

GI number: 161870825

Start: 1956976

End: 1957641

Strand: Reverse

Name: 161870825

Synonym: NMCC_1907

Alternate gene names: NA

Gene position: 1957641-1956976 (Counterclockwise)

Preceding gene: 161870826

Following gene: 161870824

Centisome position: 90.91

GC content: 45.35

Gene sequence:

>666_bases
TTGATACATTTCATTTATAGTTCCGCCTATTTGAAAATAGAAAATATGAATTCGACCGCAAGTAAAACCCTGAAAGGATT
GTCGCTGGTGTTTTTCGCCTCTGGATTCTGCGCCCTGATTTACCAGGTCAGCTGGCAGAGGCTTCTATTCAGTCACATAG
GTATCGATTTGAGTTCGATTACTGTCATTATTTCTGTATTTATGGTCGGCTTGGGTGTAGGTGCGTATTTCGGTGGACGC
ATTGCTGACCGTTTTCCTTCAAGTATCATCCCCCTGTTTTGCATCGCTGAAGTATCCATCGGTCTGTTCGGTTTGGTAAG
CAGGGGTCTGATTTCCGGCTTGGGGCATCTTTTAGTTGAGGCTGATTTGCCCATCATCGCTGCTGCCAATTTCCTCTTAT
TGCTGCTTCCTACCTTTATGATGGGCGCGACCTTGCCCTTGCTGACCTGTTTTTTTAACCGGAAAATACATAATGTTGGC
GAGTCTATCGGTACCTTATATTTTTTCAACACTTTGGGTGCGGCACTCGGATCGCTTGCCGCCGCCGAATTTTTCTACGT
CTTTTTTACCCTCTCCCAAACCATTGCGCTGACAGCCTGCTTTAACCTTCTGATTGCTGCTTCAGTATGGCTGCGTTACA
GAAAGGATGGATATAGTGAACACTAA

Upstream 100 bases:

>100_bases
TGAACAGTGATACGCCGTTTGCGGGCTTACGAGTTTATTTTCCCGGCCTGCAGTTTGAGCAATACGGTGATTTCCTACGG
TTAATACAAATGTTTACACA

Downstream 100 bases:

>100_bases
ACCGAATACTAGTTTGATTTATATGCTTTCTTTCCTTAGCGGCTTATTGAGCTTGGGTATAGAAGTCTTGTGGGTAAGGA
TGTTTTCGTTCGCAGCACAG

Product: putative integral membrane protein

Products: NA

Alternate protein names: Spermidine Synthase; Integral Membrane Protein; Spermine/Spermidine Synthase Family Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIHFIYSSAYLKIENMNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSSITVIISVFMVGLGVGAYFGGR
IADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHLLVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVG
ESIGTLYFFNTLGAALGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH

Sequences:

>Translated_221_residues
MIHFIYSSAYLKIENMNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSSITVIISVFMVGLGVGAYFGGR
IADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHLLVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVG
ESIGTLYFFNTLGAALGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH
>Mature_221_residues
MIHFIYSSAYLKIENMNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSSITVIISVFMVGLGVGAYFGGR
IADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHLLVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVG
ESIGTLYFFNTLGAALGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24110; Mature: 24110

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHFIYSSAYLKIENMNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSSI
CEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHLLVE
HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAALGSLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIHFIYSSAYLKIENMNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSSI
CEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHLLVE
HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAALGSLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA