Click here to switch to the map view.

The map label for this gene is 161870826

Identifier: 161870826

GI number: 161870826

Start: 1957795

End: 1958172

Strand: Reverse

Name: 161870826

Synonym: NMCC_1908

Alternate gene names: NA

Gene position: 1958172-1957795 (Counterclockwise)

Preceding gene: 161870829

Following gene: 161870825

Centisome position: 90.93

GC content: 37.04

Gene sequence:

>378_bases
ATGAGAAAAAGTCGTCTAAGCCGGTATAAACAAAATAAACTCATTGAGCTATTTGTCGCAGGTGTAACTGCAAGAACAGC
AACAGAGCCCGACAGCATTGTTTATACGGATTGTTATCGTAGCTATGATGTATTAGATGTGAGCGAATTTAGCCATTTCC
GTATCAATCACAGCACACATTTTGCTGAACGACAAAACCATATCAATGGAATTGAGAATTTTTGGAGCCAGGCAAAACGT
CATTTACGCAAGTTTAACGGCATTCCCAAAGCGCATTTTGAGCTGTATTTAAAGGAGTGCGAATGGCGTTTTAACAACAG
TGAGATAAAAGTTCAAATTTCCATTTTAAAACAATTAGTAAAATCGAGTTTATCTTAG

Upstream 100 bases:

>100_bases
AAAATCAATATCATATAAATTTATGCTTTTTAAATCCAATTTAATCATTAGGGCTGTCCTAGATAAATAGGGAAATTCAA
ATTAAGTTAGAATTATCCCT

Downstream 100 bases:

>100_bases
TTGTCCAGGACAGCCCCATTATTTTTATAACACCGTGAAGCCGCACAGCAGTTTGAACAGTGATACGCCGTTTGCGGGCT
TACGAGTTTATTTTCCCGGC

Product: IS1016 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDVLDVSEFSHFRINHSTHFAERQNHINGIENFWSQAKR
HLRKFNGIPKAHFELYLKECEWRFNNSEIKVQISILKQLVKSSLS

Sequences:

>Translated_125_residues
MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDVLDVSEFSHFRINHSTHFAERQNHINGIENFWSQAKR
HLRKFNGIPKAHFELYLKECEWRFNNSEIKVQISILKQLVKSSLS
>Mature_125_residues
MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDVLDVSEFSHFRINHSTHFAERQNHINGIENFWSQAKR
HLRKFNGIPKAHFELYLKECEWRFNNSEIKVQISILKQLVKSSLS

Specific function: Unknown

COG id: COG3676

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To insertion element IS1016 transposase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14837; Mature: 14837

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDVLDVSEFSHFRINHSTH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEECCCCCCEEECCCHH
FAERQNHINGIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNNSEIKVQISILKQLV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
KSSLS
HHHCC
>Mature Secondary Structure
MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDVLDVSEFSHFRINHSTH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEECCCCCCEEECCCHH
FAERQNHINGIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNNSEIKVQISILKQLV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
KSSLS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]