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The map label for this gene is natC [H]

Identifier: 161870584

GI number: 161870584

Start: 1684797

End: 1686200

Strand: Reverse

Name: natC [H]

Synonym: NMCC_1650

Alternate gene names: 161870584

Gene position: 1686200-1684797 (Counterclockwise)

Preceding gene: 161870585

Following gene: 161870581

Centisome position: 78.3

GC content: 52.42

Gene sequence:

>1404_bases
ATGACATTGCTCAATCTAATGATAATGCAAGATTACGGTATTTCCGTTTGCCTGACACTGACGCCCTATTTGCAACATGA
ACTATTTTCGGCTATGAAATCCTATTTTTCCAAATATATCCTACCCGTTTCACTTTTTACCTTGCCACTATCCCTTTCCC
CATCCGTTTCGGCTTTTACGCTGCCTGAAGCATGGCGGGCGGCGCAGCAACATTCGGCTGATTTTCAAGCGTCCCATTAC
CAGCGTGATGCAGTGCGCGCACGGCAACAACAAGCCAAGGCCGCATTCCTTCCCCATGTATCCGCCAATGCCAGCTACCA
GCGCCAGCCGCCATCGATTTCTTCCACCCGCGAAACACAGGGATGGAGCGTGCAGGTGGGACAAACCTTATTTGACGCTG
CCAAATTTGCACAATACCGCCAAAGCAGGTTCGATACGCAGGCTGCAGAACAGCGTTTCGATGCGGCACGCGAAGAATTG
CTGTTGAAAGTTGCCGAAAGTTATTTCAACGTTTTACTCAGCCGAGACACCGTTGCCGCCCATGCGGCGGAAAAAGAGGC
TTATGCCCAGCAGGTAAGGCAGGCGCAGGCTTTATTCAATAAAGGTGCTGCCACCGCGCTGGATATTCACGAAGCCAAAG
CCGGTTACGACAATGCCCTGGCCCAAGAAATCGCCGTATTGGCTGAGAAACAAACCTATGAAAACCAGTTGAACGACTAC
ACCGGCCTGGACAGCAAACAAATCGAGGCCATAGATACCGCCAACCTGTTGGCACGCTATCTGCCCAAGCTGGAACGTTA
CAGTCTGGATGAATGGCAGCGCATTGCCTTATCCAACAATCATGAATACCGGATGCAGCAGCTTGCCCTGCAAAGCAGCG
GACAGGCGCTTCGGGCAGCACAGAACAGCCGCTATCCCACCGTTTCTGCCCATGTCGGCTATCAGAATAACCTCTACACT
TCATCTGCGCAGAATAATGACTACCACTATCGGGGCAAAGGGATGAGCGTCGGCGTACAGTTGAATTTGCCGCTTTATAC
CGGCGGAGAATTGTCGGGCAAAATCCATGAAGCCGAAGCGCAATACGGGGCCGCCGAAGCACAGCTGACCGCAACCGAGC
GGCACATCAAACTCGCCGTACGCCAGGCTTATACCGAAAGCGGTGCGGCGCGTTACCAAATCATGGCGCAAGAACGGGTT
TTGGAAAGCAGCCGTTTGAAACTGAAATCGACCGAAACCGGCCAACAATACGGCATCCGCAACCGGCTGGAAGTAATACG
GGCGCGGCAGGAAGTCGCCCAAGCAGAACAGAAACTGGCTCAAGCACGGTATAAATTCATGCTGGCTTATTTGCGCTTGG
TGAAAGAGAGCGGGTTAGGGTTGGAAACGGTATTTGCGGAATAA

Upstream 100 bases:

>100_bases
CCAAATTGGACGAAAGCTTTAGGGAGCGATAGGCGGATCCATACTGGGCATTTGTTATCCGCCGGTTCGGACATGCAGAC
TGCCTGAAACCATTGCCCGG

Downstream 100 bases:

>100_bases
AGCAGGCTGAAACGGTTATGAAATTCCCAAAGCAGCCTGCACCCCGTTTCGAAAGTGCAGGCTGCTTTGGGATTGATCCG
ATACTTTCACATTCTCATTG

Product: periplasmic type I secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHY
QRDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDY
TGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYT
SSAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERV
LESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAE

Sequences:

>Translated_467_residues
MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHY
QRDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDY
TGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYT
SSAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERV
LESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAE
>Mature_466_residues
TLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQ
RDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREELL
LKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDYT
GLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTS
SAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERVL
ESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAE

Specific function: May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=438, Percent_Identity=26.4840182648402, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52484; Mature: 52352

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFT
CCHHHEEHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
LPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQ
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREELLLKVAESYFNVLLSRDTVAA
CCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
HAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
TGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHH
QNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEA
HCCCCCEEEEECCCCCCEEECCCCCCCCEEECCCEEEEEEEECCEEECCCCCCCEEHHHH
QYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERVLESSRLKLKSTETGQQYGIR
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHCHH
NRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure 
TLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFT
CHHHEEHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
LPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQ
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREELLLKVAESYFNVLLSRDTVAA
CCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
HAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
TGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHH
QNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEA
HCCCCCEEEEECCCCCCEEECCCCCCCCEEECCCEEEEEEEECCEEECCCCCCCEEHHHH
QYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERVLESSRLKLKSTETGQQYGIR
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHCHH
NRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]