Definition | Neisseria meningitidis 053442, complete genome. |
---|---|
Accession | NC_010120 |
Length | 2,153,416 |
Click here to switch to the map view.
The map label for this gene is ybjX [C]
Identifier: 161870227
GI number: 161870227
Start: 1267204
End: 1268157
Strand: Direct
Name: ybjX [C]
Synonym: NMCC_1268
Alternate gene names: 161870227
Gene position: 1267204-1268157 (Clockwise)
Preceding gene: 161870226
Following gene: 161870228
Centisome position: 58.85
GC content: 52.1
Gene sequence:
>954_bases TTGGCACGGCAAACGACCCGAATGAAGCAGAACCGCACCTTTACCTTCCCCGATTTTCGCACCGTTTACAGCTATGCGCC TTTATATCGGCTGCAACATTTAAAATACACATTGCGAAAATTTTTCGGAAAAAAAGAAATTTACGCCTTCGAGCAGTTTG TCAACGCCTCCCCTATCCGTCAGGGGCTGTTCCTCCACTGCCCGCAAAATGCCTATCCGCTGCTGCGCGAATTTGTTGAC AGGCGTTTTAACTGCAAACGCCGTTTAGATGCGATGACGGCAGATTTTCTCATGGCGGAAAAACTGTTCGGCACAGACAT TCTGCACCAAATGGAAGACTACCGCTTCCATTTGGTCTTGGCGCACCTTTCAGACGGCATCAGCTTGTGGCTCAACCGCA ACGACAACTGCGTCGAAGAAGGCGCGTGGTCTTTATCTTTGCGCGATGAAGCAGGCAACCGGCTGTATATGGCGACTTTC GCCTTTGTCGGCACACACCTGCTGACAGCCTCCGTACAAGGGCCTGCGGGTGAAGAAGCCAAAGACACTGTCCGCCGCAT CACCAAACAACTTCACGGCTTGCGTCCCCAACAACTGATGGTAACCGCACTGCAATATTTCGCCGCCGTACTCGGCTTGG ACGGCGCGATGGGCATTGCACAAAAACATCAGGTCAAACTGCGCTGGAAACTTAAAAAACGTGTCAAAATGAATTACGAC ACATTCTGGCAGGAATACGGCGCAAGTTTGGAACGGGACGGCTACTGGCATCTCCCCCAAACCCCCGCCCGCAAAGACCT TGCCGACATCGAAAGCAAAAAACGCTCGATGTACCGCAAGCGTTATGAAATGCTGGACAACATGGTTGCAGAGATGAAGG ACGGTCTGAAAACAGAAGCACGCGGCATTTCAGACGGCATCCAAACGGAAAAACCGCTCCGCCGGACAGCCTGA
Upstream 100 bases:
>100_bases TCAGCGGCGGCGGACTGCCCGTCGGTGTTCAGCTTATCGGCAACTACTTCGCCGAAGCCAGAATACTCGGTGCGGCGCAT CAAATCCAACTCAACAGCGA
Downstream 100 bases:
>100_bases CGCGAAGACTATCGAATTGATATTTTAGAGAAAGAAGCTCTTATGACCTGGGAAACCGTAATCGGCTTGGAAATCCACGT CCAATTGAACACCAAATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MARQTTRMKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFEQFVNASPIRQGLFLHCPQNAYPLLREFVD RRFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATF AFVGTHLLTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQVKLRWKLKKRVKMNYD TFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYEMLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA
Sequences:
>Translated_317_residues MARQTTRMKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFEQFVNASPIRQGLFLHCPQNAYPLLREFVD RRFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATF AFVGTHLLTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQVKLRWKLKKRVKMNYD TFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYEMLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA >Mature_316_residues ARQTTRMKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFEQFVNASPIRQGLFLHCPQNAYPLLREFVDR RFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFA FVGTHLLTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQVKLRWKLKKRVKMNYDT FWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYEMLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA
Specific function: Unknown
COG id: COG2990
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787103, Length=161, Percent_Identity=29.8136645962733, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007488 [H]
Pfam domain/function: PF04393 DUF535 [H]
EC number: NA
Molecular weight: Translated: 37097; Mature: 36966
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQTTRMKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFEQFVNASPIR CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH QGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRFHLVL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHLLTASVQGPAGEEA EECCCCEEEEECCCCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHH KDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQVKLRWKLKKRVKMNYD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHCCHH TFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYEMLDNMVAEMKDGLKTEA HHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH RGISDGIQTEKPLRRTA HCCCCCCCCCCCHHCCC >Mature Secondary Structure ARQTTRMKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFEQFVNASPIR CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH QGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRFHLVL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHLLTASVQGPAGEEA EECCCCEEEEECCCCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHH KDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQVKLRWKLKKRVKMNYD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHCCHH TFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYEMLDNMVAEMKDGLKTEA HHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH RGISDGIQTEKPLRRTA HCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]