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The map label for this gene is ccsB [H]

Identifier: 161869416

GI number: 161869416

Start: 439162

End: 441114

Strand: Direct

Name: ccsB [H]

Synonym: NMCC_0424

Alternate gene names: 161869416

Gene position: 439162-441114 (Clockwise)

Preceding gene: 161869415

Following gene: 161869417

Centisome position: 20.39

GC content: 49.77

Gene sequence:

>1953_bases
ATGCGCTTTGCGGTCGCTTTGCTCAGTCTGCTGGGTATTGCATCGGTTATCGGTACGGTGTTGCAGCAAAACCAGCCGCA
GACGGATTATTTGGTCAAATTCGGACCTTTTTGGGCGCAGATTTTTGGTTTTCTGGGACTGTATGACGTCTATGCTTCGG
CATGGTTTGTCGTTATCATGATGTTTTTGGTGGTTTCTACCAGTTTGTGCCTGATTCGCAATGTGCCGCCGTTCTGGCGC
GAAATGAAGTCTTTTCGGGAAAAGGTTAAAGAAAAATCTCTGGCGGCGATGCGCCATTCTTCGCTGTTGGATGTAAAAAT
TGCGCCCGAGGTTGCCAAACGTTATCTGGAAGTACAAGGTTTTCAGGGAAAAACCATTAACCGTGAAGACGGGTCGGTTC
TGATTGCCGCCAAAAAAGGCACAATGAACAAATGGGGCTATATCTTTGCCCATGTTGCTTTGATTGTCATTTGCCTGGGC
GGGTTGATAGACAGTAACCTGCTGTTGAAACTGGGTATGCTGACCGGTCGGATTGTTCCGGACAATCAGGCGGTTTATGC
CAAGGATTTCAAGCCCGAAAGTATTTTGAGTGCGTCCAATCTCTCATTTAGGGGCAACGTCAATATTTCCGAGGGGCAGA
GTGCGGATGTGGTTTTCCTGAATGCCGACAACGGGATATTGGTTCAGGACTTGCCTTTTGAAGTCAAACTGAAAAAATTC
CATATCGATTTTTACAATACGGGTATGCCGCGTGATTTCGCCAGCGATATTGAAGTGACGGACAAGGCAACCGGTGAGAA
ACTCGAGCGCACCATCCGCGTGAACCATCCTTTGACCTTGCACGGCATCACGATTTATCAGGCGAGTTTTGCCGACGGCG
GTTCGGATTTGACATTCAAGGCGTGGAATTTGGGTGATGCTTCGCGCGAGCCTGTCGTGTTGAAGGCAACATCCATACAC
CAGTTTCCGTTGGAAATTGGCAAACACAAATATCGTCTTGAGTTCGATCAGTTCACTTCTATGAATGTGGAGGACATGAG
CGAGGGCGCGGAACGGGAAAAAAGCCTGAAATCCACGCTGAACGATGTCCGCGCCGTTACTCAGGAAGGTAAAAAATACA
CCAATATCGGCCCTTCCATTGTTTACCGTATCCGTGATGCGGCAGGGCAGGCGGTCGAATATAAAAACTATATGCTGCCG
GTTTTGCAGGAACAGGATTATTTTTGGATTACCGGCACGCGCAGCGGCTTGCAGCAGCAATACCGCTGGCTGCGTATCCC
CTTGGACAAGCAGTTGAAAGCGGACACCTTTATGGCATTGCGTGAGTTTTTGAAAGATGGGGAAGGGCGCAAACGTCTGG
TTGCCGACGCAACCAAAGACGCACCTGCCGAAATCCGCGAACAATTCATGCTGGCTGCGGAAAACACGCTGAACATCTTT
GCACAAAAAGGCTATTTGGGATTGGACGAATTTATTACGTCCAATATCCCGAAAGAGCAGCAGGATAAGATGCAGGGTTA
TTTCTACGAAATGCTTTACGGCGTGATGAACGCTGCTTTGGATGAAACCATACGCCGGTACGGCTTGCCCGAATGGCAGC
AGGATGAAGCGCGGAACCGTTTCCTGCTGCACAGTATGGATGCGTACACGGGTTTGACCGAATATCCCGCGCCTATGCTG
CTGCAACTTGATGGGTTTTCCGAGGTGCGTTCGTCGGGTTTGCAGATGACCCGTTCCCCGGGTGCGCTTTTGGTCTATCT
CGGCTCGGTGCTGTTGGTATTGGGTACGGTATTGATGTTTTATGTGCGCGAAAAACGGGCGTGGGTATTGTTTTCAGACG
GCAAAATCCGTTTTGCCATGTCTTCGGCCCGCAGCGAACGGGATTTGCAGAAGGAATTTCCAAAACACGTCGAGAGTCTG
CAACGGCTCGGCAAGGACTTGAATCATGACTGA

Upstream 100 bases:

>100_bases
TGCTTTCCCATATTCCTGATGGCGGAATAAACACACAATGAGTAAATCCCGTAGATCTCCCCCACTTCTTTCCCGTCCGT
GGTTCGCTTTTTTCAGCTCC

Downstream 100 bases:

>100_bases
ACACTATAAAACCCTTCCGGAACACGAGCTGCTGATTCAGAAGTCTTTGATCAGCAATCTGAATCTTTGGGATTGGGTAT
TTGCCGTGCTGGTTTTTGCG

Product: cytochrome c-type biogenesis protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGFLGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWR
EMKSFREKVKEKSLAAMRHSSLLDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVVFLNADNGILVQDLPFEVKLKKF
HIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIH
QFPLEIGKHKYRLEFDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLP
VLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKDAPAEIREQFMLAAENTLNIF
AQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPML
LQLDGFSEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESL
QRLGKDLNHD

Sequences:

>Translated_650_residues
MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGFLGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWR
EMKSFREKVKEKSLAAMRHSSLLDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVVFLNADNGILVQDLPFEVKLKKF
HIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIH
QFPLEIGKHKYRLEFDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLP
VLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKDAPAEIREQFMLAAENTLNIF
AQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPML
LQLDGFSEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESL
QRLGKDLNHD
>Mature_650_residues
MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGFLGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWR
EMKSFREKVKEKSLAAMRHSSLLDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVVFLNADNGILVQDLPFEVKLKKF
HIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIH
QFPLEIGKHKYRLEFDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLP
VLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKDAPAEIREQFMLAAENTLNIF
AQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPML
LQLDGFSEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESL
QRLGKDLNHD

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 73707; Mature: 73707

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGFLGLYDVYASAWFVVIM
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
MFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSLLDVKIAPEVAKRYLEVQG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC
FQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLGGLIDSNLLLKLGMLTGRIVP
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEECC
DNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVVFLNADNGILVQDLPFEVKLKKF
CCCEEEECCCCCHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEE
HIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITIYQASFADGGSDLTFK
EEEEECCCCCCCHHCCCCCCCCCCHHHHHHHEEECCCEEEEEEEEEEEECCCCCCCEEEE
AWNLGDASREPVVLKATSIHQFPLEIGKHKYRLEFDQFTSMNVEDMSEGAEREKSLKSTL
EECCCCCCCCCEEEEECCCHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH
NDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLPVLQEQDYFWITGTRSGLQQQ
HHHHHHHHCCCEECCCCHHHHHHHHHHCCCEEEHHHHHCCEEECCCEEEEECCHHHHHHH
YRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKDAPAEIREQFMLAAENTLNIF
HHEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCHHHHHHHHHHHHCCHHEEE
AQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIRRYGLPEWQQDEARNR
EECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCE
FLLHSMDAYTGLTEYPAPMLLQLDGFSEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMF
EEEEECHHHCCCCCCCCCEEEEECCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHH
YVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESLQRLGKDLNHD
HHHCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGFLGLYDVYASAWFVVIM
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
MFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSLLDVKIAPEVAKRYLEVQG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC
FQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLGGLIDSNLLLKLGMLTGRIVP
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEECC
DNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVVFLNADNGILVQDLPFEVKLKKF
CCCEEEECCCCCHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEE
HIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITIYQASFADGGSDLTFK
EEEEECCCCCCCHHCCCCCCCCCCHHHHHHHEEECCCEEEEEEEEEEEECCCCCCCEEEE
AWNLGDASREPVVLKATSIHQFPLEIGKHKYRLEFDQFTSMNVEDMSEGAEREKSLKSTL
EECCCCCCCCCEEEEECCCHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH
NDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLPVLQEQDYFWITGTRSGLQQQ
HHHHHHHHCCCEECCCCHHHHHHHHHHCCCEEEHHHHHCCEEECCCEEEEECCHHHHHHH
YRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKDAPAEIREQFMLAAENTLNIF
HHEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCHHHHHHHHHHHHCCHHEEE
AQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIRRYGLPEWQQDEARNR
EECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCE
FLLHSMDAYTGLTEYPAPMLLQLDGFSEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMF
EEEEECHHHCCCCCCCCCEEEEECCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHH
YVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESLQRLGKDLNHD
HHHCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA