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The map label for this gene is cyc [H]

Identifier: 161869415

GI number: 161869415

Start: 438262

End: 438885

Strand: Direct

Name: cyc [H]

Synonym: NMCC_0423

Alternate gene names: 161869415

Gene position: 438262-438885 (Clockwise)

Preceding gene: 161869413

Following gene: 161869416

Centisome position: 20.35

GC content: 50.48

Gene sequence:

>624_bases
ATGAAACGATTGACTTTATTGGCCTTTGTTTTGGCTGCCGGTGCGGTTTCCGCCTCTCCCAAAGCAGACGTGGAAAAAGG
CAAACAGGTTGCCGCAACGGTTTGTGCGGCTTGCCATGCAGCAGACGGTAACAGCGGCATTGCGATGTATCCGCGTTTGG
CGGCACAGCATACTGCTTACATCTATCATCAAACTATCGGCATCCGCGACGGTAAACGCACCCACGGTTCGGCAGCTGTG
ATGAAACCGGTGGTAATGAATTTGAGCGATCAGGATATTTTGAACGTATCCGCATTCTATGCCAAACAGCAGCCCAAATC
CGGTGAAGCCAATCCTAAGGAAAATCCCGAATTGGGTGCGAAAATCTATCGCGGCGGTTTGAGCGATAAAAAAGTGCCGG
CGTGTATGTCCTGCCACGGTCCGAGCGGTGCGGGTATGCCGGGAGGCGGAAGCGAAATTCAGGCTTATCCGCGTTTGGGC
GGTCAGCATCAGGCATATATTGTTGAACAGATGAATGCCTACAAGTCCGGTCAGCGTAAAAATACCATCATGGAAGATAT
TGCAAACCGTATGTCTGAAGAAGATTTGAAAGCGGTCGCCAACTTTATCCAAGGTTTGCGTTAA

Upstream 100 bases:

>100_bases
ACGTTTGCAGAATCATCGGTTTTAATCGGGTCAAAAATCCCGTATTTGAATATAAAAAGAGCATTGTTGCGTTATCCAAT
GCTGTAATCAGGAGCACTCC

Downstream 100 bases:

>100_bases
TTCCGCAATAGTCTGTTTTAGAGGCCGTCTGAAAAGTTTTCAGACGGCTTCAGGCAATTCTGCGATAAGTTTTTTCAATC
GCAACCGTTGGAATCGATGC

Product: cytochrome C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAV
MKPVVMNLSDQDILNVSAFYAKQQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR

Sequences:

>Translated_207_residues
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAV
MKPVVMNLSDQDILNVSAFYAKQQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR
>Mature_207_residues
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAV
MKPVVMNLSDQDILNVSAFYAKQQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21989; Mature: 21989

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAY
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH
IYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAKQQPKSGEANPKENPELGA
HHHHEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
KIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLGGQHQAYIVEQMNAYKSGQRK
HHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHH
NTIMEDIANRMSEEDLKAVANFIQGLR
HHHHHHHHHHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAY
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH
IYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAKQQPKSGEANPKENPELGA
HHHHEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
KIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLGGQHQAYIVEQMNAYKSGQRK
HHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHH
NTIMEDIANRMSEEDLKAVANFIQGLR
HHHHHHHHHHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]