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The map label for this gene is yccS [C]

Identifier: 161525260

GI number: 161525260

Start: 2293127

End: 2295418

Strand: Direct

Name: yccS [C]

Synonym: Bmul_2090

Alternate gene names: 161525260

Gene position: 2293127-2295418 (Clockwise)

Preceding gene: 161525255

Following gene: 161525261

Centisome position: 66.5

GC content: 65.49

Gene sequence:

>2292_bases
ATGCGCTATTCGGTCGAAATCAGAAAGTTTCTTTACAGCCAGTACTTTTTCGGCGGCCTGCGGATCGCAGTCGGCGTATC
GTTGCCGGCCGTGCTGTGTCTGATCGTGTTTCACAACCGCGAGCTCGGCTTCACGATCTCGACGGGCGCGCTCGGCGCCT
GCGTCGTCGACATGCCGGGCCCGCTGAAGTACAAGCACAACGAAATGCTTGCGTGCAGCGTGATCGGCGGGCTCGCGGCG
CTCGCGACCGGGCTCGCGACACCGAACATCTTCGCGCTGTGGCTGACCATCGTGCCGCTCACGTTCGTGCTGTCGCTGAT
CGTCGTCTACGGCAACCGCTGGCCGCAGATCAGCTTCGCGACGCTGTTCATGATGGTGATGACGCTCGAAGAAAAGCTCA
CGCCGCTGCAGGCGTTCGTCAATGCCGGATGGATTCTCGCGGGCGGCCTCTGGTACACGTACTGGGCGACGCTCGTCTCG
CAGTGGCAGGCGCGCCGCATCGAGCAGCAGGCACTCGCCGAGAGCCTGTTCGCATGCGCGGACTACCTGCTCGCGCGCGC
GCAGTTCTACGATCTCGACGCCGATCTCGACGAGTGCTACCGGAACCTCGTCGCCAAGCAGATCACCGCGGTCGAAACGC
AGGAAACCGCACGCGACATCGTGCTGCGCAATCTGCCGAAGCTGCGGCGCGGCAAGCTCGATCCGGGCCGCACGACGATG
TTCAACCTGTTCATCAACAGCGTCGACCTGCACGAGCTGTTCGTCGGCGCGCATACCGACTACCCGCTGATGCGCAACAC
GTTCGGCGGATCGGACCTGATCATCTTCTACCGCGACCTGATCCGCAAGGCGGCCGCCGATCTCGAGCAGATCGGCCTCG
CGGTGCTCGAGAACCGCGCGCCGCACGCGCGCATCAGTGTGAAGGCCGAACTGCGCGCGATCGAATACGAGATCGAGCTG
ATGCGCAAGAAGCAGTTCCCGGCGACGCACGCGGAAGCATACGCGGCCGTGCTCGCGACGTTCCGGCGCATCTGGAGCGG
GACGCGGCTGATCGACCGCATGCGGCGCAACCTGTCCGGCCATGCCGATCCGCAGCAGACGGAGCTGAAGATCGACAAGG
CGCTCACGCGCTTCCTGCAGCGCCGCCGGATGTCGCCGCTGCTGATCTTCTCGAACCTGAACATGCGCTCGCCGAGCTTT
CGCCACGCGCTACGCGTGACGATCGCGGTGGCGGTCGGATTCTGGCTCGGCCGCCTGCTGCCGCTCACGAACGCCTACTG
GATCGTGATGACGAGCATCATCATCCTGAAGCCCGGCTACTCGCTGACCAAGCAGCGCAACGCGCAGCGGATCATCGGCA
CGCTGATCGGCTGCGCGGCGAGCCTCGCGCTGATCTACACGGTCAAGGATTCGCATCTGCTGATCGCGATGATGTTCGGC
TCGATGGTGATGAGCTACAGCCTGCTGCTGTTCAATTACGCGGCGAGCGTCGTGTTCACGTCGTCCTACGTGCTGCTGAT
GTTCCACCTGCTCGCGCCGGGCAACATGCGCATCATCGGCGAGCGCGCGATCGATACCGTCGTCGGCTGCATGATCGCGA
TCGCCGCCAGCCGGCTGTTCCCGTACTGGGAATACCGGCTGATGGGCAAGCTCGTCGCCGACATGCTGACGGCGACGCGC
AAGTATTTCGAAGCCGTGTGGCGCGCGGGGCGCGGCGCGTCACCGCCGGCCGTGCCTGTGGCCGACGGCGCGGCGGTCGT
GCCCGGCGTGGCGGCGGCGATCGAGGCGCCGTCCACGAGCCTCGACGACGACTATCGCTACCGGCTCGCGCGCAAGGACG
TGCATATCGCGTTCGCGAATCTCGGGCAGGCATTCCAGCGGATGATGATCGAGCCGAAGGCGCACCAGCGCTTCGTGCCC
GAGCTGAACGACCTGCTCGTGCAGACGCATGTGCTCGGCGCACAGATCACGGCCGCCGCGCCGCTGATCCGCGCCGCGTG
CGCAGCCGACGGCAACATCCCGCAGGACGACGCGTTGCAGCGCGGCCTCGCCGCCGTGCTCGAGAATCTGAAGAAGGCGG
AAGCCGGCGAGCCGCCGCCGGCCGACCAGCTTGAAGCGACGAAGCAGATCACGCGCGACCTCGATGCGATGGTCGTGTCC
GCCGAGCAATCCGACGCGGTCGATGCCGATCTGACCTACGACCTGAAGGTGCTCGCGCATCAGTGCAAGCAGATGCTTGC
GTCGTCGCTGCTGATCCGCAAGGATGCGAGCGTGATCCGGCTGCCAGCATGA

Upstream 100 bases:

>100_bases
ATCGGCCGGACGGCCAGGTTTTGCGGCGCGCGAAATACGATAGACTCGTCGCCAGTCAATACGCCGCCCCGGGCGTCTTC
GTCAGCCATTCAGCCCATCG

Downstream 100 bases:

>100_bases
TCGGCGCGGCCGCGGCCGGCCGCGTGTCGTCTACCGCGCGTGGCCTGCCGCCCGTCGGCTCTCGCACGTCGCTGTCGCGC
ATCGGCCGTCGCGCATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 763; Mature: 763

Protein sequence:

>763_residues
MRYSVEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGGLAA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKLTPLQAFVNAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
FNLFINSVDLHELFVGAHTDYPLMRNTFGGSDLIIFYRDLIRKAAADLEQIGLAVLENRAPHARISVKAELRAIEYEIEL
MRKKQFPATHAEAYAAVLATFRRIWSGTRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNAQRIIGTLIGCAASLALIYTVKDSHLLIAMMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKLVADMLTATR
KYFEAVWRAGRGASPPAVPVADGAAVVPGVAAAIEAPSTSLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVP
ELNDLLVQTHVLGAQITAAAPLIRAACAADGNIPQDDALQRGLAAVLENLKKAEAGEPPPADQLEATKQITRDLDAMVVS
AEQSDAVDADLTYDLKVLAHQCKQMLASSLLIRKDASVIRLPA

Sequences:

>Translated_763_residues
MRYSVEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGGLAA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKLTPLQAFVNAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
FNLFINSVDLHELFVGAHTDYPLMRNTFGGSDLIIFYRDLIRKAAADLEQIGLAVLENRAPHARISVKAELRAIEYEIEL
MRKKQFPATHAEAYAAVLATFRRIWSGTRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNAQRIIGTLIGCAASLALIYTVKDSHLLIAMMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKLVADMLTATR
KYFEAVWRAGRGASPPAVPVADGAAVVPGVAAAIEAPSTSLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVP
ELNDLLVQTHVLGAQITAAAPLIRAACAADGNIPQDDALQRGLAAVLENLKKAEAGEPPPADQLEATKQITRDLDAMVVS
AEQSDAVDADLTYDLKVLAHQCKQMLASSLLIRKDASVIRLPA
>Mature_763_residues
MRYSVEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGGLAA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKLTPLQAFVNAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
FNLFINSVDLHELFVGAHTDYPLMRNTFGGSDLIIFYRDLIRKAAADLEQIGLAVLENRAPHARISVKAELRAIEYEIEL
MRKKQFPATHAEAYAAVLATFRRIWSGTRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNAQRIIGTLIGCAASLALIYTVKDSHLLIAMMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKLVADMLTATR
KYFEAVWRAGRGASPPAVPVADGAAVVPGVAAAIEAPSTSLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVP
ELNDLLVQTHVLGAQITAAAPLIRAACAADGNIPQDDALQRGLAAVLENLKKAEAGEPPPADQLEATKQITRDLDAMVVS
AEQSDAVDADLTYDLKVLAHQCKQMLASSLLIRKDASVIRLPA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=686, Percent_Identity=23.0320699708455, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI87082248, Length=324, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84811; Mature: 84811

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSVEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPG
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGGLAALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEEKLTPLQAFVNAGWILAGGLWYTYWATLVSQWQARRIEQQALAESLFACA
HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHH
FNLFINSVDLHELFVGAHTDYPLMRNTFGGSDLIIFYRDLIRKAAADLEQIGLAVLENRA
HHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PHARISVKAELRAIEYEIELMRKKQFPATHAEAYAAVLATFRRIWSGTRLIDRMRRNLSG
CCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
HADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSFRHALRVTIAVAVGFWLGRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTSIIILKPGYSLTKQRNAQRIIGTLIGCAASLALIYTVKDSHLLIAMMFG
HHCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
PYWEYRLMGKLVADMLTATRKYFEAVWRAGRGASPPAVPVADGAAVVPGVAAAIEAPSTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCC
LDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVPELNDLLVQTHVLGAQITAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
PLIRAACAADGNIPQDDALQRGLAAVLENLKKAEAGEPPPADQLEATKQITRDLDAMVVS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEE
AEQSDAVDADLTYDLKVLAHQCKQMLASSLLIRKDASVIRLPA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRYSVEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPG
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGGLAALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEEKLTPLQAFVNAGWILAGGLWYTYWATLVSQWQARRIEQQALAESLFACA
HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHH
FNLFINSVDLHELFVGAHTDYPLMRNTFGGSDLIIFYRDLIRKAAADLEQIGLAVLENRA
HHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PHARISVKAELRAIEYEIELMRKKQFPATHAEAYAAVLATFRRIWSGTRLIDRMRRNLSG
CCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
HADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSFRHALRVTIAVAVGFWLGRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTSIIILKPGYSLTKQRNAQRIIGTLIGCAASLALIYTVKDSHLLIAMMFG
HHCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
PYWEYRLMGKLVADMLTATRKYFEAVWRAGRGASPPAVPVADGAAVVPGVAAAIEAPSTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCC
LDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVPELNDLLVQTHVLGAQITAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
PLIRAACAADGNIPQDDALQRGLAAVLENLKKAEAGEPPPADQLEATKQITRDLDAMVVS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEE
AEQSDAVDADLTYDLKVLAHQCKQMLASSLLIRKDASVIRLPA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]