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The map label for this gene is ycgG [H]

Identifier: 161525255

GI number: 161525255

Start: 2281852

End: 2283123

Strand: Direct

Name: ycgG [H]

Synonym: Bmul_2085

Alternate gene names: 161525255

Gene position: 2281852-2283123 (Clockwise)

Preceding gene: 161525254

Following gene: 161525260

Centisome position: 66.17

GC content: 69.58

Gene sequence:

>1272_bases
ATGAAGTCCTCGCGCGACCTCTCGCTCGACTCCCTCCTCGATCGCCTGACGCCGACACCCGGCGGCTGGGTCGCGACCTA
CCGCGGCACGACGCTGCGCAGCGCGTTCCAGCCCGTGCTGTCGATCACGCACAAACGCGTGGTCGGCTACGAGGCACTGC
TGCGCGTGGTCGACGCGAACGGCACGCTGATCTCGCCGACCGCGCTGTTCGACCGCACGCGCAACGACGCCGATTCGTTG
CTGCTCGACCGGCTCGCGCGCTGCCTGCATACGGCCAACTTCGTCGCGCAAGGCATCGGCGACGGCTGGCTGTTCCTGAA
CGTGACGCCGCGCGTGCTCGATTCGGGCCTCGTGCAGCGCGAGTTCGTCGAAGCGCTGTGCCGCCACTTCTCGCTGTCGC
CGAACCGCATCGTGCTCGAGGTCATCGAGCAGCCGGCGCGCGACGAAGCCGCACTGGCGCGCACGATCGACATGATCCAG
CATCGCGACTTCCTGATCGCGATCGACGACTTCGGCACCGGATTCTCGAACTTCGACCGCGTGTGGCGGGCGCGGCCCGA
CATCGTGAAGCTCGACCGTTCGCTCGTCGAACGTTCGACATGGTCGCCCGACGATCGCCGGATCATGCATCACCTCGTGT
CGATGCTGCATCAGGCCGGTGCGATGGTGCTCGCCGAAGGCGTCGAAAGCAACGACGCGCTGCAAGCGCTGATGGATGCC
GACATCGACTTCGTGCAGGGCTTCCAGTTCGGCCAGCCCGACACGTCGATCGCGCACGCGAGTGCGGCCGCGCCCGCGAT
GCTCGATGCGGCGTGGCAGCGCTTCATCGCGCGCCGGCATGCGCCGCCGGCCCCCGCGCAGCCGGGCTTCGACGCGATCG
AGCGGCTCGTGCTCGCGGGCGCTGCGGCGTTTGCCGCGAGCGGCGATCTGCACGATGCCGCGCAGCGCGTGTTTGCGGTG
CCGGCCGCACGGCGCGTGTTCGTCACCGACGAGATCGGCGAGCAGTTCCTGCCGTCGATCGGCGCACCGGGCCCGGCCGG
CACGACGCGGCTCGCGCCGCTGTTTCCGGAGACCCACAGCAACTGGTCGCGGCGGCCCTACTTCCAGCGCGCGATCGCGG
CGCCCGGCCGCGTCGCGCTGATGGGGCCGCATTTTTCGCTGACCGAAGGCCGCGACTGCTATACGGCGGCCGTCGCGACG
CATGCACGCGGGAAGCTCGTCGTGTTCTGCGTCGACTTCGTGCTCGACAGCGCGGGCACGGTGATGCGCTAG

Upstream 100 bases:

>100_bases
TCCCGATGTCCCACGTTCTCCCGCATCCGCGTTCGCGCGCGATCGCACCTGCGTGGCGGCGTGAAATCGCCCCTTCCGTT
CGCGCCCGCGCGCTCCCGAC

Downstream 100 bases:

>100_bases
CGCGGGATGGCGTGCGTTCCAAGGCGCGATGGACGCAGCACGTTTGCGCTGCCGCTCAGTCGACGATCTTGCCGCGCCCC
GACTTCACCGCGCTACGGCG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKSSRDLSLDSLLDRLTPTPGGWVATYRGTTLRSAFQPVLSITHKRVVGYEALLRVVDANGTLISPTALFDRTRNDADSL
LLDRLARCLHTANFVAQGIGDGWLFLNVTPRVLDSGLVQREFVEALCRHFSLSPNRIVLEVIEQPARDEAALARTIDMIQ
HRDFLIAIDDFGTGFSNFDRVWRARPDIVKLDRSLVERSTWSPDDRRIMHHLVSMLHQAGAMVLAEGVESNDALQALMDA
DIDFVQGFQFGQPDTSIAHASAAAPAMLDAAWQRFIARRHAPPAPAQPGFDAIERLVLAGAAAFAASGDLHDAAQRVFAV
PAARRVFVTDEIGEQFLPSIGAPGPAGTTRLAPLFPETHSNWSRRPYFQRAIAAPGRVALMGPHFSLTEGRDCYTAAVAT
HARGKLVVFCVDFVLDSAGTVMR

Sequences:

>Translated_423_residues
MKSSRDLSLDSLLDRLTPTPGGWVATYRGTTLRSAFQPVLSITHKRVVGYEALLRVVDANGTLISPTALFDRTRNDADSL
LLDRLARCLHTANFVAQGIGDGWLFLNVTPRVLDSGLVQREFVEALCRHFSLSPNRIVLEVIEQPARDEAALARTIDMIQ
HRDFLIAIDDFGTGFSNFDRVWRARPDIVKLDRSLVERSTWSPDDRRIMHHLVSMLHQAGAMVLAEGVESNDALQALMDA
DIDFVQGFQFGQPDTSIAHASAAAPAMLDAAWQRFIARRHAPPAPAQPGFDAIERLVLAGAAAFAASGDLHDAAQRVFAV
PAARRVFVTDEIGEQFLPSIGAPGPAGTTRLAPLFPETHSNWSRRPYFQRAIAAPGRVALMGPHFSLTEGRDCYTAAVAT
HARGKLVVFCVDFVLDSAGTVMR
>Mature_423_residues
MKSSRDLSLDSLLDRLTPTPGGWVATYRGTTLRSAFQPVLSITHKRVVGYEALLRVVDANGTLISPTALFDRTRNDADSL
LLDRLARCLHTANFVAQGIGDGWLFLNVTPRVLDSGLVQREFVEALCRHFSLSPNRIVLEVIEQPARDEAALARTIDMIQ
HRDFLIAIDDFGTGFSNFDRVWRARPDIVKLDRSLVERSTWSPDDRRIMHHLVSMLHQAGAMVLAEGVESNDALQALMDA
DIDFVQGFQFGQPDTSIAHASAAAPAMLDAAWQRFIARRHAPPAPAQPGFDAIERLVLAGAAAFAASGDLHDAAQRVFAV
PAARRVFVTDEIGEQFLPSIGAPGPAGTTRLAPLFPETHSNWSRRPYFQRAIAAPGRVALMGPHFSLTEGRDCYTAAVAT
HARGKLVVFCVDFVLDSAGTVMR

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=232, Percent_Identity=28.448275862069, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1790496, Length=223, Percent_Identity=25.5605381165919, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788849, Length=225, Percent_Identity=26.2222222222222, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081743, Length=224, Percent_Identity=25.4464285714286, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87082096, Length=130, Percent_Identity=30, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787055, Length=232, Percent_Identity=26.2931034482759, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786507, Length=120, Percent_Identity=29.1666666666667, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 46312; Mature: 46312

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSRDLSLDSLLDRLTPTPGGWVATYRGTTLRSAFQPVLSITHKRVVGYEALLRVVDAN
CCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTLISPTALFDRTRNDADSLLLDRLARCLHTANFVAQGIGDGWLFLNVTPRVLDSGLVQR
CCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
EFVEALCRHFSLSPNRIVLEVIEQPARDEAALARTIDMIQHRDFLIAIDDFGTGFSNFDR
HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
VWRARPDIVKLDRSLVERSTWSPDDRRIMHHLVSMLHQAGAMVLAEGVESNDALQALMDA
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHC
DIDFVQGFQFGQPDTSIAHASAAAPAMLDAAWQRFIARRHAPPAPAQPGFDAIERLVLAG
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
AAAFAASGDLHDAAQRVFAVPAARRVFVTDEIGEQFLPSIGAPGPAGTTRLAPLFPETHS
HHHHHCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
NWSRRPYFQRAIAAPGRVALMGPHFSLTEGRDCYTAAVATHARGKLVVFCVDFVLDSAGT
CCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCCCC
VMR
CCC
>Mature Secondary Structure
MKSSRDLSLDSLLDRLTPTPGGWVATYRGTTLRSAFQPVLSITHKRVVGYEALLRVVDAN
CCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTLISPTALFDRTRNDADSLLLDRLARCLHTANFVAQGIGDGWLFLNVTPRVLDSGLVQR
CCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
EFVEALCRHFSLSPNRIVLEVIEQPARDEAALARTIDMIQHRDFLIAIDDFGTGFSNFDR
HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
VWRARPDIVKLDRSLVERSTWSPDDRRIMHHLVSMLHQAGAMVLAEGVESNDALQALMDA
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHC
DIDFVQGFQFGQPDTSIAHASAAAPAMLDAAWQRFIARRHAPPAPAQPGFDAIERLVLAG
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
AAAFAASGDLHDAAQRVFAVPAARRVFVTDEIGEQFLPSIGAPGPAGTTRLAPLFPETHS
HHHHHCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
NWSRRPYFQRAIAAPGRVALMGPHFSLTEGRDCYTAAVATHARGKLVVFCVDFVLDSAGT
CCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCCCC
VMR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]