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The map label for this gene is amaB [H]

Identifier: 161525233

GI number: 161525233

Start: 2255936

End: 2257207

Strand: Reverse

Name: amaB [H]

Synonym: Bmul_2063

Alternate gene names: 161525233

Gene position: 2257207-2255936 (Counterclockwise)

Preceding gene: 161525234

Following gene: 161525232

Centisome position: 65.46

GC content: 72.01

Gene sequence:

>1272_bases
ATGAAAGATCTGTTGGAAATCGACGGCGAGCGCCTGTGGCGTAGCCTGACGGACATGGCGCGCATCGGCGCGACGCCGCG
CGGCGGCGTGCGGCGGCTCGCGCTCACCGACGACGACCGGCGCGGGCGCGACCTGTTCGCGCAGTGGTGCCGCGACGCGG
GCATGTCGGTCAGCGTCGACGAGGTCGGCAACCTGTTCGCACGGCGCGACGGCGCGGACGCGCACGCGGCGCCGGTGCTG
ATCGGCAGCCATCTCGACACGCAGCCCGAAGGCGGGCGCTTCGACGGCGTGTACGGCGTGCTGGCCGCGCTCGAACTCGT
GCGCACGCTGAACGATGCGCGCATCGTGACGAACAAGCCGCTCGAGATCGTGTCGTGGACGAACGAGGAGGGTGCACGCT
TCGCGCCGGCGATGCTCGGTTCGGCCGTGTTCACCGGCGCGCTGCCGCTTGCCGACGCGCTCGCGACGCGCGATGCCGAC
GGCGTGTCGCTCGGCGACGCGCTCGACGCCTGCGGCTATCGCGGCACGCGGCGCATGGGCGGCGCGGTCGACGCGTATTT
CGAAGCGCATATCGAGCAGGGGCCCGTGCTCGAGGCGAACGGCACGACGATCGGGATCGTGACGGGCGGGCAGGCGATTC
GCTGGCTCGACGTGACGGTCACGGGCGTGGCCGCGCATGCGGGCACGACGCCGATGCCGTACCGTCGCGACGCCTATTTC
GCGGCCGCGCAGATCGCGCTCGATCTGGAGCGGATCGTCGCGGGCTATGCGCCGCGCGGCCTCGCGACGATCGGCCAGAT
CGCCGTTCGCAACGCGTCGCGCAACACGATTGCGGGCGAGCTGACCTTCACCGTCGATCTGCGTCATCACGACGATGCCG
AAGTCGATGCGATGGAACGCGCGCTGCGCGATGCAGCGGCGCGCGTGGCGGCCGCGCGCGGCGTGCAGGTCGCGATCGAG
ACTTGCTGGCGCAGCCCGGCGACGCCGTTCGATCGCGCGTGCGTCGAACTCGTCGCGCAGGCCGCGGACGCGTTCGGCTA
CCGCAGCGAGCGGATCGTCAGCGGTGCCGGGCACGACGCGATCGTGCTCGCGCGCAGCGTGCCGACTGCGATGGTGTTCA
TTCCGTGCGTCGACGGGCTGTCGCACAACGAAGCCGAAGATGCGCTGCCGGACGACGTGACGCGCGGCACGAACGTGCTG
CTGCACGCGGTGCTTGCGCGGGCGGGCGTCGCGGCGTGTGCGGACGCCGCGGCAGCCGCGCCGCGCGCATGA

Upstream 100 bases:

>100_bases
TGCATCGTCGCGCTCGATGCGCGCCGCGCGGCGCAGCCGGCCGCCGCCGAAGCGCTCGGCACGCATTGAGCATCGACCCA
CGGTTTTATCGGGAGTGCAT

Downstream 100 bases:

>100_bases
CGATGCATTTCGACGAGGACGATCGATGAAGACGTATTTCCATCCCGAGCAATTGCTGCACCATCCGCGCACCTATCTGT
CGCGCGGGCAGATGCGCGCG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKDLLEIDGERLWRSLTDMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMSVSVDEVGNLFARRDGADAHAAPVL
IGSHLDTQPEGGRFDGVYGVLAALELVRTLNDARIVTNKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLADALATRDAD
GVSLGDALDACGYRGTRRMGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRRDAYF
AAAQIALDLERIVAGYAPRGLATIGQIAVRNASRNTIAGELTFTVDLRHHDDAEVDAMERALRDAAARVAAARGVQVAIE
TCWRSPATPFDRACVELVAQAADAFGYRSERIVSGAGHDAIVLARSVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVL
LHAVLARAGVAACADAAAAAPRA

Sequences:

>Translated_423_residues
MKDLLEIDGERLWRSLTDMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMSVSVDEVGNLFARRDGADAHAAPVL
IGSHLDTQPEGGRFDGVYGVLAALELVRTLNDARIVTNKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLADALATRDAD
GVSLGDALDACGYRGTRRMGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRRDAYF
AAAQIALDLERIVAGYAPRGLATIGQIAVRNASRNTIAGELTFTVDLRHHDDAEVDAMERALRDAAARVAAARGVQVAIE
TCWRSPATPFDRACVELVAQAADAFGYRSERIVSGAGHDAIVLARSVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVL
LHAVLARAGVAACADAAAAAPRA
>Mature_423_residues
MKDLLEIDGERLWRSLTDMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMSVSVDEVGNLFARRDGADAHAAPVL
IGSHLDTQPEGGRFDGVYGVLAALELVRTLNDARIVTNKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLADALATRDAD
GVSLGDALDACGYRGTRRMGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRRDAYF
AAAQIALDLERIVAGYAPRGLATIGQIAVRNASRNTIAGELTFTVDLRHHDDAEVDAMERALRDAAARVAAARGVQVAIE
TCWRSPATPFDRACVELVAQAADAFGYRSERIVSGAGHDAIVLARSVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVL
LHAVLARAGVAACADAAAAAPRA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=392, Percent_Identity=32.9081632653061, Blast_Score=202, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44644; Mature: 44644

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLLEIDGERLWRSLTDMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMSVSVD
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEHH
EVGNLFARRDGADAHAAPVLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDARIVTNKP
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC
LEIVSWTNEEGARFAPAMLGSAVFTGALPLADALATRDADGVSLGDALDACGYRGTRRMG
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHCC
GAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRRDAYF
CHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCHHH
AAAQIALDLERIVAGYAPRGLATIGQIAVRNASRNTIAGELTFTVDLRHHDDAEVDAMER
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHH
ALRDAAARVAAARGVQVAIETCWRSPATPFDRACVELVAQAADAFGYRSERIVSGAGHDA
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCE
IVLARSVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVLLHAVLARAGVAACADAAAAA
EEEEECCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRA
CCC
>Mature Secondary Structure
MKDLLEIDGERLWRSLTDMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMSVSVD
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEHH
EVGNLFARRDGADAHAAPVLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDARIVTNKP
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC
LEIVSWTNEEGARFAPAMLGSAVFTGALPLADALATRDADGVSLGDALDACGYRGTRRMG
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHCC
GAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRRDAYF
CHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCHHH
AAAQIALDLERIVAGYAPRGLATIGQIAVRNASRNTIAGELTFTVDLRHHDDAEVDAMER
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHH
ALRDAAARVAAARGVQVAIETCWRSPATPFDRACVELVAQAADAFGYRSERIVSGAGHDA
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCE
IVLARSVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVLLHAVLARAGVAACADAAAAA
EEEEECCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]