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The map label for this gene is 161509571

Identifier: 161509571

GI number: 161509571

Start: 1443035

End: 1443427

Strand: Reverse

Name: 161509571

Synonym: USA300HOU_1341

Alternate gene names: NA

Gene position: 1443427-1443035 (Counterclockwise)

Preceding gene: 161509572

Following gene: 161509568

Centisome position: 50.24

GC content: 28.75

Gene sequence:

>393_bases
ATGTATAAAAATTATAACATGACCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAAATGATAATACGCG
ATATGTTAATGAAATTGTTGAAACGATATCTGATAGCGAATTCGATGAATTTATATGTCCTAATAACAAAAGAATAGGTT
TTAAAAGATATGCATACCGTAATGATAGATATAGTTTTAAACGTGACTTCAAGCTATATGAATGTGATGACTGTTCATCA
TGTTCTTTGAGACATCAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAATTATGAAGAATTATAATTGGGAATACTT
TAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAATCTATAGTCAAAGAAAAATTGATGTAG

Upstream 100 bases:

>100_bases
ACTTGCACATAAATGTAAAATTCAATAAAATAAATTTTCTGTGTTGGATCCCTTCGTATAATTTAATAAATACTACTAAA
CTAAATTAACGAGGTGCCTT

Downstream 100 bases:

>100_bases
AGCCTGTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAG
CTAGGTTTTGTATTAATGGC

Product: IS1272 transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase ; Truncated

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MYKNYNMTQLTLPIETSVRIPQNDNTRYVNEIVETISDSEFDEFICPNNKRIGFKRYAYRNDRYSFKRDFKLYECDDCSS
CSLRHQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKSIVKEKLM

Sequences:

>Translated_130_residues
MYKNYNMTQLTLPIETSVRIPQNDNTRYVNEIVETISDSEFDEFICPNNKRIGFKRYAYRNDRYSFKRDFKLYECDDCSS
CSLRHQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKSIVKEKLM
>Mature_130_residues
MYKNYNMTQLTLPIETSVRIPQNDNTRYVNEIVETISDSEFDEFICPNNKRIGFKRYAYRNDRYSFKRDFKLYECDDCSS
CSLRHQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKSIVKEKLM

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15729; Mature: 15729

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKNYNMTQLTLPIETSVRIPQNDNTRYVNEIVETISDSEFDEFICPNNKRIGFKRYAYR
CCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEC
NDRYSFKRDFKLYECDDCSSCSLRHQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPET
CCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHH
KKSIVKEKLM
HHHHHHHHCC
>Mature Secondary Structure
MYKNYNMTQLTLPIETSVRIPQNDNTRYVNEIVETISDSEFDEFICPNNKRIGFKRYAYR
CCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEC
NDRYSFKRDFKLYECDDCSSCSLRHQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPET
CCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHH
KKSIVKEKLM
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA