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The map label for this gene is msa

Identifier: 161509567

GI number: 161509567

Start: 1439242

End: 1439643

Strand: Reverse

Name: msa

Synonym: USA300HOU_1336

Alternate gene names: 161509567

Gene position: 1439643-1439242 (Counterclockwise)

Preceding gene: 161509568

Following gene: 161509557

Centisome position: 50.11

GC content: 22.14

Gene sequence:

>402_bases
ATGAAATATCTTATCCTTAGTTTAGTTGCTAATTTATTAGTTTTCGGTGTATTATCTGCAATTGGATTAAATATTAATAT
TTTAGCAGCAATGATGATTGTATTAGTGATTCCGATAATGATTTCTGGGATACTATTTTTCAAAACTAATATTGATAAAA
CATACATATTTTTTAACATCATATTTATCGACTTTTATTACTATATTTACAATGTACATTTAATGACTTTGCCAAAGTTT
AATAATTATATTAAAGCAGAGATGATGGAATTAGAAGATATTGATGTATTAATTACAAGTAAAGATTTTGGATTTGATGA
AATTCTGTTTTATACATTATATTTGTTGTTAATTCTTATCGTTTTATATTATTTGAAAAAGCAAGTAAAGCATAAAATCT
AA

Upstream 100 bases:

>100_bases
AACCAAATTGAGAACTCTTTTTTTATATCACCAACATTGTTTGCAATAGAAAAATATATTTATATAATATAATTATGGTG
TACAACGACGAGGTGATTTT

Downstream 100 bases:

>100_bases
TTTCATGATGCTTGTTTAAAGTGTGGTATGTATATGATGCTTTAAATTAGTTGAATAGGGCTAACTAAATATAAAGGATT
AATGACAAAAAGAAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Modulator of sarA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNIIFIDFYYYIYNVHLMTLPKF
NNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILIVLYYLKKQVKHKI

Sequences:

>Translated_133_residues
MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNIIFIDFYYYIYNVHLMTLPKF
NNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILIVLYYLKKQVKHKI
>Mature_133_residues
MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNIIFIDFYYYIYNVHLMTLPKF
NNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILIVLYYLKKQVKHKI

Specific function: Accessory element involved in the expression of sarA and several virulence factors. Modulates sarA production and/or function in a strain-dependent manner. Affects the transcription of the accessory gene regulator (agr) and genes encoding virulence factor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MSA_STAA3 (Q2FH37)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493991.1
- EnsemblBacteria:   EBSTAT00000037140
- GeneID:   3913289
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1294
- GeneTree:   EBGT00050000025241
- HOGENOM:   HBG215682
- OMA:   DEILFFT
- ProtClustDB:   CLSK885328

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15657; Mature: 15657

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16226fa0)-; HASH(0x15d35f9c)-; HASH(0x162420fc)-; HASH(0x166b17b4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHH
IFIDFYYYIYNVHLMTLPKFNNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILI
HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH
VLYYLKKQVKHKI
HHHHHHHHHHCCH
>Mature Secondary Structure
MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHH
IFIDFYYYIYNVHLMTLPKFNNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILI
HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH
VLYYLKKQVKHKI
HHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA