Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is yxeK [H]
Identifier: 16119875
GI number: 16119875
Start: 72521
End: 73768
Strand: Direct
Name: yxeK [H]
Synonym: Atu6061
Alternate gene names: 16119875
Gene position: 72521-73768 (Clockwise)
Preceding gene: 159161961
Following gene: 16119876
Centisome position: 33.85
GC content: 61.38
Gene sequence:
>1248_bases ATGACCAGCCGTCCTCTCGCTCTTCTGGTCAATCCCCTGCTGTGCGGCCACCACGAGGCAGCCTGGCGGACGGAACGCGC ACAGCCCGAGCGGATTCACAGTCTCGATTACTTCCAGCAACTCGCCCGGACTGCCGAACGTGGACGATTCGACGCCGTGT TCATGGCCGACTTTTTCATCTTCAATCCTGCGGTCATGTACAGCCCGCGTTGGGAAGTCGAGCCCGTCACGCTCTTGTCT GCGGTCGCTCAAGCAACCGAGAATCTCGGTTTCATCGCCACGGGCTCGGCGATCTTCTCCGATCCGGTTGAGATCGCCCG GGTCTTTTCGACCTTCGACCATGCCACGGGAGGCCGCGCTGCCTGGAACATCGTGACCTCGGGCGAGCCAGCGGCCGGTG CCAACTACGGCCTCGATAAGCCGATCCCCCATGCCGAGCGCTATGAATTGGGCGCGCGCAACACAGAACAGGTGCTCGCA TACTGGGACGGCGCACCGGTCCCCGACGATGTTGCACCGATTGCCCGTCCGGTCCAGGGCCGCCCGGTTCTGGTGCAGGC CGGGTCTTCCGCCACGGGGCGAGATTTCGCGGCCCGTTTCGCCGAACTGGTGTTTAGCGCCCAATGGAATTTCGAAGCTG GCAGGGACTTCAGAAATGACCTTAGGCGCCGCGCCGTGACGCATGGCCGAAACCCCGATGATGTGCGTCTTATCCTGGGC CTCAGCTTTGTCATCGGCTCCACCGAGGCAGAGGCCCGCAGCAAGAAGAAGGCGCTTGACGACCTGATCCTGCCACACGC CTCTCATAGCTGGCTACAGAGTTTCGGTATCGACCTGACCGCGTTCGATTTCGACGAGCCCCTGCCGCGGACACTCGGGA ACATCGATCTGTATGAGGGCATCAAGAGCCGCTTTTCGGTCATTTCATCCCTGGTTGACAGCACATCGCCACTAACCATC CGGCAACTGGCCAGCGCCTTGGCCGGAAGCCGCGGCCATCATCTTGTTATCGGCACGCCGGAACAAATCGCTGATGCGGC AGAAACCTGGTTTCTGGGAGGGGCGACGGACGGATTTATGGTGATGCCCCATGAATTGCCTGCGGAATTCGAGTTGTTTG TGGACGAGGTCATCCCGATCCTGCGTCGTCGAGGCCTCGTGGATCGCGATTATCGTGGACATACGCTTCGCGAGAACCTT GGGCTGCCCATCAGCCCGTCCGCGCCGTCATGGGCATTCCAGACATGA
Upstream 100 bases:
>100_bases TTGGGTTATGGTCAAAGCCGCGCGGAAGCAATTTGCGTGACACGCTTGGGTTATCTCGTCCGGAAAGCCTGTTTGCCCTT AGAAGAAATGGAGTTTCCGC
Downstream 100 bases:
>100_bases ATATCGAACAGGGTTCCACCGGACAGCGGCGGCAAGATAGCTGTCGCAATTCCGAGCATGTTCGGGATACGCACGTCTTT AAAGACCTGTCCGTCGATTA
Product: nitrilotriacetate monooxygenase
Products: an aldehyde; SO3; H2O; FMN [C]
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTSRPLALLVNPLLCGHHEAAWRTERAQPERIHSLDYFQQLARTAERGRFDAVFMADFFIFNPAVMYSPRWEVEPVTLLS AVAQATENLGFIATGSAIFSDPVEIARVFSTFDHATGGRAAWNIVTSGEPAAGANYGLDKPIPHAERYELGARNTEQVLA YWDGAPVPDDVAPIARPVQGRPVLVQAGSSATGRDFAARFAELVFSAQWNFEAGRDFRNDLRRRAVTHGRNPDDVRLILG LSFVIGSTEAEARSKKKALDDLILPHASHSWLQSFGIDLTAFDFDEPLPRTLGNIDLYEGIKSRFSVISSLVDSTSPLTI RQLASALAGSRGHHLVIGTPEQIADAAETWFLGGATDGFMVMPHELPAEFELFVDEVIPILRRRGLVDRDYRGHTLRENL GLPISPSAPSWAFQT
Sequences:
>Translated_415_residues MTSRPLALLVNPLLCGHHEAAWRTERAQPERIHSLDYFQQLARTAERGRFDAVFMADFFIFNPAVMYSPRWEVEPVTLLS AVAQATENLGFIATGSAIFSDPVEIARVFSTFDHATGGRAAWNIVTSGEPAAGANYGLDKPIPHAERYELGARNTEQVLA YWDGAPVPDDVAPIARPVQGRPVLVQAGSSATGRDFAARFAELVFSAQWNFEAGRDFRNDLRRRAVTHGRNPDDVRLILG LSFVIGSTEAEARSKKKALDDLILPHASHSWLQSFGIDLTAFDFDEPLPRTLGNIDLYEGIKSRFSVISSLVDSTSPLTI RQLASALAGSRGHHLVIGTPEQIADAAETWFLGGATDGFMVMPHELPAEFELFVDEVIPILRRRGLVDRDYRGHTLRENL GLPISPSAPSWAFQT >Mature_414_residues TSRPLALLVNPLLCGHHEAAWRTERAQPERIHSLDYFQQLARTAERGRFDAVFMADFFIFNPAVMYSPRWEVEPVTLLSA VAQATENLGFIATGSAIFSDPVEIARVFSTFDHATGGRAAWNIVTSGEPAAGANYGLDKPIPHAERYELGARNTEQVLAY WDGAPVPDDVAPIARPVQGRPVLVQAGSSATGRDFAARFAELVFSAQWNFEAGRDFRNDLRRRAVTHGRNPDDVRLILGL SFVIGSTEAEARSKKKALDDLILPHASHSWLQSFGIDLTAFDFDEPLPRTLGNIDLYEGIKSRFSVISSLVDSTSPLTIR QLASALAGSRGHHLVIGTPEQIADAAETWFLGGATDGFMVMPHELPAEFELFVDEVIPILRRRGLVDRDYRGHTLRENLG LPISPSAPSWAFQT
Specific function: Involved In Desulfonation Of Aliphatic Sulfonates. Catalyzes The Conversion Of Pentanesulfonic Acid To Sulfite And Pentaldehyde And Is Able To Desulfonate A Wide Range Of Sulfonated Substrates Including C-2 To C-10 Unsubstituted Linear Alkanesulfonates, S
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: 1.14.14.5 [C]
Molecular weight: Translated: 45729; Mature: 45598
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRPLALLVNPLLCGHHEAAWRTERAQPERIHSLDYFQQLARTAERGRFDAVFMADFFI CCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FNPAVMYSPRWEVEPVTLLSAVAQATENLGFIATGSAIFSDPVEIARVFSTFDHATGGRA HCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCE AWNIVTSGEPAAGANYGLDKPIPHAERYELGARNTEQVLAYWDGAPVPDDVAPIARPVQG EEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHEEEEECCCCCCCCHHHHCCCCCC RPVLVQAGSSATGRDFAARFAELVFSAQWNFEAGRDFRNDLRRRAVTHGRNPDDVRLILG CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE LSFVIGSTEAEARSKKKALDDLILPHASHSWLQSFGIDLTAFDFDEPLPRTLGNIDLYEG HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHHHCCCHHHHH IKSRFSVISSLVDSTSPLTIRQLASALAGSRGHHLVIGTPEQIADAAETWFLGGATDGFM HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHEEECCCCCCCE VMPHELPAEFELFVDEVIPILRRRGLVDRDYRGHTLRENLGLPISPSAPSWAFQT ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSRPLALLVNPLLCGHHEAAWRTERAQPERIHSLDYFQQLARTAERGRFDAVFMADFFI CCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FNPAVMYSPRWEVEPVTLLSAVAQATENLGFIATGSAIFSDPVEIARVFSTFDHATGGRA HCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCE AWNIVTSGEPAAGANYGLDKPIPHAERYELGARNTEQVLAYWDGAPVPDDVAPIARPVQG EEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHEEEEECCCCCCCCHHHHCCCCCC RPVLVQAGSSATGRDFAARFAELVFSAQWNFEAGRDFRNDLRRRAVTHGRNPDDVRLILG CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE LSFVIGSTEAEARSKKKALDDLILPHASHSWLQSFGIDLTAFDFDEPLPRTLGNIDLYEG HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHHHCCCHHHHH IKSRFSVISSLVDSTSPLTIRQLASALAGSRGHHLVIGTPEQIADAAETWFLGGATDGFM HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHEEECCCCCCCE VMPHELPAEFELFVDEVIPILRRRGLVDRDYRGHTLRENLGLPISPSAPSWAFQT ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: an alkanesulfonate; O2; FMNH2 [C]
Specific reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + SO3 + H2O + FMN [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]