Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is yxeK [H]
Identifier: 159161961
GI number: 159161961
Start: 71649
End: 72524
Strand: Direct
Name: yxeK [H]
Synonym: Atu6060
Alternate gene names: 159161961
Gene position: 71649-72524 (Clockwise)
Preceding gene: 16119873
Following gene: 16119875
Centisome position: 33.44
GC content: 57.99
Gene sequence:
>876_bases ATGGGCGTTCGCCAAGTATTCGGGCTTGGGCTGATGATATCAGACCCAATCACTACGGCAGATCTTGTTACGGTCGCCCG AACGGCTGAGAAGGCGGGATTCACGACACTGACTATCGGGGGCAGGGAAACCATCCTGGATCCAACAACAATCCTGGCCG CGCTGGCGGCCAGGACCGAGCAGATCGGGCTGGTTGCGGCGGTGAACGTCGATACGGCTCTGCCTTATGATTTTGCACGC CGTCTGGCGTCTCTTGATCACCTCTCGAGTGGACGGGCAGGCTGGAAGCCATATTCGACTGCCGATGAGCCTGAAGAAGC CCGGATCGCGGAGTTCGTGCATGCCGTCAGCCACCTCCTGGACAGCTGGGATGACGATGCCGCCCTTTACGACAAGGAGA GTGGAATTTATGTCGACATCAGCAAGGTTCATCGGCTCGATCACATCGGGGAATATTATAGGGTAGCTGGCCCGCTCGAT ATACCACGCGCCCCTCAAGGTCGACCGGTCCTGGTTCGAGAGGTCCTCGCTGCCGATCTTGCCGAAGGCGCATGGCCCAC GGCGGACATCATTGAAATCGTTCCGGTCCCCGGTCAGAGCACGAACAAGCCCCTCGCACCTCGTGCCGAGGGAAATACCA CCCTTCTAAGTATCGTTGCAGACACTAACGATCTCGCGTCGATGCATGCACTGCTCAACGATGGGGACGTTGATGGAGCA ACTGTCCGTGTAGCGCCACGGATCGATGCCGTCGCGCGGGCAGCGAGAGATATTGGGTTATGGTCAAAGCCGCGCGGAAG CAATTTGCGTGACACGCTTGGGTTATCTCGTCCGGAAAGCCTGTTTGCCCTTAGAAGAAATGGAGTTTCCGCATGA
Upstream 100 bases:
>100_bases ATTTCGATCTTGATTTTTCGACCAAAAACGCACGTTCACGCAACTTGGGTCTGGCTCAGCAACACGAACACGCGTTCAAC AAAATGAGAAGGGTATGTTG
Downstream 100 bases:
>100_bases CCAGCCGTCCTCTCGCTCTTCTGGTCAATCCCCTGCTGTGCGGCCACCACGAGGCAGCCTGGCGGACGGAACGCGCACAG CCCGAGCGGATTCACAGTCT
Product: nitrilotriacetate monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGVRQVFGLGLMISDPITTADLVTVARTAEKAGFTTLTIGGRETILDPTTILAALAARTEQIGLVAAVNVDTALPYDFAR RLASLDHLSSGRAGWKPYSTADEPEEARIAEFVHAVSHLLDSWDDDAALYDKESGIYVDISKVHRLDHIGEYYRVAGPLD IPRAPQGRPVLVREVLAADLAEGAWPTADIIEIVPVPGQSTNKPLAPRAEGNTTLLSIVADTNDLASMHALLNDGDVDGA TVRVAPRIDAVARAARDIGLWSKPRGSNLRDTLGLSRPESLFALRRNGVSA
Sequences:
>Translated_291_residues MGVRQVFGLGLMISDPITTADLVTVARTAEKAGFTTLTIGGRETILDPTTILAALAARTEQIGLVAAVNVDTALPYDFAR RLASLDHLSSGRAGWKPYSTADEPEEARIAEFVHAVSHLLDSWDDDAALYDKESGIYVDISKVHRLDHIGEYYRVAGPLD IPRAPQGRPVLVREVLAADLAEGAWPTADIIEIVPVPGQSTNKPLAPRAEGNTTLLSIVADTNDLASMHALLNDGDVDGA TVRVAPRIDAVARAARDIGLWSKPRGSNLRDTLGLSRPESLFALRRNGVSA >Mature_290_residues GVRQVFGLGLMISDPITTADLVTVARTAEKAGFTTLTIGGRETILDPTTILAALAARTEQIGLVAAVNVDTALPYDFARR LASLDHLSSGRAGWKPYSTADEPEEARIAEFVHAVSHLLDSWDDDAALYDKESGIYVDISKVHRLDHIGEYYRVAGPLDI PRAPQGRPVLVREVLAADLAEGAWPTADIIEIVPVPGQSTNKPLAPRAEGNTTLLSIVADTNDLASMHALLNDGDVDGAT VRVAPRIDAVARAARDIGLWSKPRGSNLRDTLGLSRPESLFALRRNGVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 31129; Mature: 30997
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRQVFGLGLMISDPITTADLVTVARTAEKAGFTTLTIGGRETILDPTTILAALAARTE CCHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHH QIGLVAAVNVDTALPYDFARRLASLDHLSSGRAGWKPYSTADEPEEARIAEFVHAVSHLL HCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DSWDDDAALYDKESGIYVDISKVHRLDHIGEYYRVAGPLDIPRAPQGRPVLVREVLAADL HCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHH AEGAWPTADIIEIVPVPGQSTNKPLAPRAEGNTTLLSIVADTNDLASMHALLNDGDVDGA HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCE TVRVAPRIDAVARAARDIGLWSKPRGSNLRDTLGLSRPESLFALRRNGVSA EEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCC >Mature Secondary Structure GVRQVFGLGLMISDPITTADLVTVARTAEKAGFTTLTIGGRETILDPTTILAALAARTE CHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHH QIGLVAAVNVDTALPYDFARRLASLDHLSSGRAGWKPYSTADEPEEARIAEFVHAVSHLL HCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DSWDDDAALYDKESGIYVDISKVHRLDHIGEYYRVAGPLDIPRAPQGRPVLVREVLAADL HCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHH AEGAWPTADIIEIVPVPGQSTNKPLAPRAEGNTTLLSIVADTNDLASMHALLNDGDVDGA HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCE TVRVAPRIDAVARAARDIGLWSKPRGSNLRDTLGLSRPESLFALRRNGVSA EEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]