Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 16119863

Identifier: 16119863

GI number: 16119863

Start: 63606

End: 64190

Strand: Direct

Name: 16119863

Synonym: Atu6051

Alternate gene names: NA

Gene position: 63606-64190 (Clockwise)

Preceding gene: 16119862

Following gene: 16119864

Centisome position: 29.69

GC content: 60.17

Gene sequence:

>585_bases
GTGAAACTTGATCCCCAAACGGTTCGGGAGCTCGCGCTTGCCTTTCTCCCGCAATCTTATGTCCGCATTATACCTGTAGC
CCACATGTCGACCCCGCTTGGCATGGGTTTCGGCCAATCGCGATTCTCGAGCCCCAACCAGATGTTCCGACTGCTTTATG
CCGCATATGATCTCGCGACCGCGATTGCGGAGACGATTGTGCGCGACCGCTTCGAGGGGACCCAGGAGCGAGTGCTGGAT
GAGAGCGAAATCGAGGACTGGTCGGTCACTGAGGTGACGGCCACGGATGCTCTCATTCTTCTCGACCTGCGCACGACCGG
CCTCCTGAGGTTGGGCGTCAGCACGGACGCAGCCCGGGGCAAGGAACATCAGGAAGGGCAGAGACTGAGCGAGTCGATCT
TTCGATCCTATGCTGTCGATGGATTGCTCTATTCCTCACGCCTCACGGCGGCAGATTGCGTGGCGGTCTACGATCGGGCT
GTCGCTGCGAAACTTGTCGCCTCTCCGGCGGTCGAGCTGGTTCGTCAAGCCGACTTGATAGCCGCCCTGCGGTTTATCGG
GGTGTCGATCCGGGCCGGGCGATAA

Upstream 100 bases:

>100_bases
CGAAGCCGAGCATTGGCGGAACGCCGCTCGACAATCTCAAAATGGGCAATCTAGACGAAGTTCTGGATGCGGCCGAGCGC
GATTTTGGTTGAGCTGAATC

Downstream 100 bases:

>100_bases
GCATGTCCGTTACAGTCACTTCCGCAAACTTCTCTGGGCGATTTACGGCGTTGAATGGCACGAAAACGTTGCCAGCGACA
CATGCCGACATCATCCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Orf_Bo

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLATAIAETIVRDRFEGTQERVLD
ESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARGKEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRA
VAAKLVASPAVELVRQADLIAALRFIGVSIRAGR

Sequences:

>Translated_194_residues
MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLATAIAETIVRDRFEGTQERVLD
ESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARGKEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRA
VAAKLVASPAVELVRQADLIAALRFIGVSIRAGR
>Mature_194_residues
MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLATAIAETIVRDRFEGTQERVLD
ESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARGKEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRA
VAAKLVASPAVELVRQADLIAALRFIGVSIRAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21322; Mature: 21322

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLAT
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH
AIAETIVRDRFEGTQERVLDESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARG
HHHHHHHHHHHCCHHHHHCCHHCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCCCCC
KEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRAVAAKLVASPAVELVRQADLI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALRFIGVSIRAGR
HHHHHHHHHEECCC
>Mature Secondary Structure
MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLAT
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH
AIAETIVRDRFEGTQERVLDESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARG
HHHHHHHHHHHCCHHHHHCCHHCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCCCCC
KEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRAVAAKLVASPAVELVRQADLI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALRFIGVSIRAGR
HHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA