Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is 16119863
Identifier: 16119863
GI number: 16119863
Start: 63606
End: 64190
Strand: Direct
Name: 16119863
Synonym: Atu6051
Alternate gene names: NA
Gene position: 63606-64190 (Clockwise)
Preceding gene: 16119862
Following gene: 16119864
Centisome position: 29.69
GC content: 60.17
Gene sequence:
>585_bases GTGAAACTTGATCCCCAAACGGTTCGGGAGCTCGCGCTTGCCTTTCTCCCGCAATCTTATGTCCGCATTATACCTGTAGC CCACATGTCGACCCCGCTTGGCATGGGTTTCGGCCAATCGCGATTCTCGAGCCCCAACCAGATGTTCCGACTGCTTTATG CCGCATATGATCTCGCGACCGCGATTGCGGAGACGATTGTGCGCGACCGCTTCGAGGGGACCCAGGAGCGAGTGCTGGAT GAGAGCGAAATCGAGGACTGGTCGGTCACTGAGGTGACGGCCACGGATGCTCTCATTCTTCTCGACCTGCGCACGACCGG CCTCCTGAGGTTGGGCGTCAGCACGGACGCAGCCCGGGGCAAGGAACATCAGGAAGGGCAGAGACTGAGCGAGTCGATCT TTCGATCCTATGCTGTCGATGGATTGCTCTATTCCTCACGCCTCACGGCGGCAGATTGCGTGGCGGTCTACGATCGGGCT GTCGCTGCGAAACTTGTCGCCTCTCCGGCGGTCGAGCTGGTTCGTCAAGCCGACTTGATAGCCGCCCTGCGGTTTATCGG GGTGTCGATCCGGGCCGGGCGATAA
Upstream 100 bases:
>100_bases CGAAGCCGAGCATTGGCGGAACGCCGCTCGACAATCTCAAAATGGGCAATCTAGACGAAGTTCTGGATGCGGCCGAGCGC GATTTTGGTTGAGCTGAATC
Downstream 100 bases:
>100_bases GCATGTCCGTTACAGTCACTTCCGCAAACTTCTCTGGGCGATTTACGGCGTTGAATGGCACGAAAACGTTGCCAGCGACA CATGCCGACATCATCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Orf_Bo
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLATAIAETIVRDRFEGTQERVLD ESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARGKEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRA VAAKLVASPAVELVRQADLIAALRFIGVSIRAGR
Sequences:
>Translated_194_residues MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLATAIAETIVRDRFEGTQERVLD ESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARGKEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRA VAAKLVASPAVELVRQADLIAALRFIGVSIRAGR >Mature_194_residues MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLATAIAETIVRDRFEGTQERVLD ESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARGKEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRA VAAKLVASPAVELVRQADLIAALRFIGVSIRAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21322; Mature: 21322
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLAT CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH AIAETIVRDRFEGTQERVLDESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARG HHHHHHHHHHHCCHHHHHCCHHCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCCCCC KEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRAVAAKLVASPAVELVRQADLI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALRFIGVSIRAGR HHHHHHHHHEECCC >Mature Secondary Structure MKLDPQTVRELALAFLPQSYVRIIPVAHMSTPLGMGFGQSRFSSPNQMFRLLYAAYDLAT CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH AIAETIVRDRFEGTQERVLDESEIEDWSVTEVTATDALILLDLRTTGLLRLGVSTDAARG HHHHHHHHHHHCCHHHHHCCHHCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCCCCC KEHQEGQRLSESIFRSYAVDGLLYSSRLTAADCVAVYDRAVAAKLVASPAVELVRQADLI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALRFIGVSIRAGR HHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA