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The map label for this gene is osmF [H]

Identifier: 160902589

GI number: 160902589

Start: 1207879

End: 1208763

Strand: Direct

Name: osmF [H]

Synonym: Pmob_1128

Alternate gene names: 160902589

Gene position: 1207879-1208763 (Clockwise)

Preceding gene: 160902588

Following gene: 160902594

Centisome position: 55.67

GC content: 35.71

Gene sequence:

>885_bases
TTGAAAAAATTGGCAGTACTTATGTTAGTTGTAGCGTTTTCTTTAACTGCGCTATTTGGTGCAACTTTAACCGTAGGTGC
AAAAAACTTCACAGAACAGTATGTTCTTGGAAATTTGGCTTCACTGCTACTTGAAGAGAATGGCTTTAACGTTGTTGAAA
GGTTCGGCCTTAGTTCCTTCGTTGCTAGACAAGGTTTGACAACAGGACAGATTGATTTATATCCAGATTACACTGGAACC
GCGTGGGTAACTTATTTAGATCAAGAAGAAATTATAAATGATCCAGATGAACTTTTAGAAAAAGTCAGAGAATTAGATGC
TGAAAATGGTGTCGTTTGGCTTGATAGAATAAACGCTAACAATACTTATGCCCTCGCTATTCGTCAAGAAGATTACGAAA
AATATGGTTTCGAAACCCTCTCTGATTTAGTTGCTTACTGGAACGAACATCCAAATGAGTTTGTGGTAGGAGTTGACTAT
GAATTCTATGAAAGACCTGATGGTTTCTTTGCCTTTGCTGACCACTATGGTTTAGATATTCAAGATTCCCAAGTATCAAC
CATGCAACTTGGATTAACTTACGAGGCAATTTCAAACAATAAAATAGATATCGCTATGGTTTTTGCTACCGATCCAAAAA
TTTTAAGATACAATCTACATGTACTAGAAGACGACCAAAACTTCTGGCCTTATTACCATATTTCTTACGCGGTTAGAAAA
GATGTACTTGATGAATACCCTGAAATTGAAGAAATTTTAAGACCTCTCACACAGTACCTAAACCAAGACATTTTAATAAG
ACTCAATTACAGAGTAGATGTTGATGGTGTTGAACCAGAAGTTGTTGCAAGAGATTATTTACAAGGTTTAGGTTTAATAG
AATAA

Upstream 100 bases:

>100_bases
AATTGATTTCATACTCGCTTTAATACAAAACAAAATGACTTCGGAAGGTATTAAATTACAAAATGAATAATGAAAAAACT
TTTAAATGGAGGTGTTAACA

Downstream 100 bases:

>100_bases
TCTCAGTTATCACATTAAAAGCCAGGAATCTCCTGGCTTTTTATTTTCTTAAAGAGTTCGACAATCTTGAACCAACAAAT
TGAATTATCTGAGTTAAGAA

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKKLAVLMLVVAFSLTALFGATLTVGAKNFTEQYVLGNLASLLLEENGFNVVERFGLSSFVARQGLTTGQIDLYPDYTGT
AWVTYLDQEEIINDPDELLEKVRELDAENGVVWLDRINANNTYALAIRQEDYEKYGFETLSDLVAYWNEHPNEFVVGVDY
EFYERPDGFFAFADHYGLDIQDSQVSTMQLGLTYEAISNNKIDIAMVFATDPKILRYNLHVLEDDQNFWPYYHISYAVRK
DVLDEYPEIEEILRPLTQYLNQDILIRLNYRVDVDGVEPEVVARDYLQGLGLIE

Sequences:

>Translated_294_residues
MKKLAVLMLVVAFSLTALFGATLTVGAKNFTEQYVLGNLASLLLEENGFNVVERFGLSSFVARQGLTTGQIDLYPDYTGT
AWVTYLDQEEIINDPDELLEKVRELDAENGVVWLDRINANNTYALAIRQEDYEKYGFETLSDLVAYWNEHPNEFVVGVDY
EFYERPDGFFAFADHYGLDIQDSQVSTMQLGLTYEAISNNKIDIAMVFATDPKILRYNLHVLEDDQNFWPYYHISYAVRK
DVLDEYPEIEEILRPLTQYLNQDILIRLNYRVDVDGVEPEVVARDYLQGLGLIE
>Mature_294_residues
MKKLAVLMLVVAFSLTALFGATLTVGAKNFTEQYVLGNLASLLLEENGFNVVERFGLSSFVARQGLTTGQIDLYPDYTGT
AWVTYLDQEEIINDPDELLEKVRELDAENGVVWLDRINANNTYALAIRQEDYEKYGFETLSDLVAYWNEHPNEFVVGVDY
EFYERPDGFFAFADHYGLDIQDSQVSTMQLGLTYEAISNNKIDIAMVFATDPKILRYNLHVLEDDQNFWPYYHISYAVRK
DVLDEYPEIEEILRPLTQYLNQDILIRLNYRVDVDGVEPEVVARDYLQGLGLIE

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=293, Percent_Identity=32.4232081911263, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33797; Mature: 33797

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLAVLMLVVAFSLTALFGATLTVGAKNFTEQYVLGNLASLLLEENGFNVVERFGLSSF
CHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHH
VARQGLTTGQIDLYPDYTGTAWVTYLDQEEIINDPDELLEKVRELDAENGVVWLDRINAN
HHHCCCCCCEEEECCCCCCCEEEEEECHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECCC
NTYALAIRQEDYEKYGFETLSDLVAYWNEHPNEFVVGVDYEFYERPDGFFAFADHYGLDI
CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEEECCCCCCC
QDSQVSTMQLGLTYEAISNNKIDIAMVFATDPKILRYNLHVLEDDQNFWPYYHISYAVRK
CCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEHHHHHH
DVLDEYPEIEEILRPLTQYLNQDILIRLNYRVDVDGVEPEVVARDYLQGLGLIE
HHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKLAVLMLVVAFSLTALFGATLTVGAKNFTEQYVLGNLASLLLEENGFNVVERFGLSSF
CHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHH
VARQGLTTGQIDLYPDYTGTAWVTYLDQEEIINDPDELLEKVRELDAENGVVWLDRINAN
HHHCCCCCCEEEECCCCCCCEEEEEECHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECCC
NTYALAIRQEDYEKYGFETLSDLVAYWNEHPNEFVVGVDYEFYERPDGFFAFADHYGLDI
CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEEECCCCCCC
QDSQVSTMQLGLTYEAISNNKIDIAMVFATDPKILRYNLHVLEDDQNFWPYYHISYAVRK
CCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEHHHHHH
DVLDEYPEIEEILRPLTQYLNQDILIRLNYRVDVDGVEPEVVARDYLQGLGLIE
HHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]