Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
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Accession | NC_010003 |
Length | 2,169,548 |
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The map label for this gene is 160901743
Identifier: 160901743
GI number: 160901743
Start: 275007
End: 276155
Strand: Direct
Name: 160901743
Synonym: Pmob_0257
Alternate gene names: NA
Gene position: 275007-276155 (Clockwise)
Preceding gene: 160901738
Following gene: 160901744
Centisome position: 12.68
GC content: 37.77
Gene sequence:
>1149_bases GTGGCAAAGTTAGTAAGAAAGAATTATCTCATGGCTCCAGGACCAACCCCAGTTCCAATTGATCTTTTATTGGAAGGTGC AAAGGATACCATCCATCATAGAACCCCACAATATTTGGAAATTCAAAGCACAGCCCTAGAAAATCTTAAATATCTCTTTC AAACAAAGAATAATGTATACACCTTAGCTGCTTCTGGAACAGGAGTAATGGAAGCTGCAGTTGCCAACCTTATTTCACCA GGTGATACGGCTATTGCTGTAAATGGAGGTAAATTTGGGGAAAGATGGTGCGAATTGTGTAAAGCTTACGATGCAAATTT AGTTGAAATCGATATCGAATGGGGAAAATATGTTCGAGTAGAACAAATCAAAAAAGCACTAGAAGAGCATCCAGAAACAA AAGCTGTTTTCACCACCATAAGCGAAACCTCTACAGGTGTTGTACATCCTATCAAAGAAATAGCTGAGATTGTAAAAGAA ACTGATGCGGTTTTAGTTGTTGATGCTATTTCTGGAATGCTGGCTGAACCTTTAAAAATGGATGATTGGAACATTGATGT AGTAGTAACTGGAGTTCAAAAGGGATTTATGATGCCTCCAGGAGTAGCGATGATAGCGTTAAGTGACAAAGCAATGAAAG TTGTTGAAAATTCTAACAACCGTAGATATTACTTTGATTTAAGAGCATATAAAAAAAGTTTCCCAGATTCTCCATATACT CCTCCTGTTAACCTTGTTTATCAGTTAGCAAAGGCAACCGAGTCGCTAAAAGAGGAAACAATTGAAAACGTTTGGGAAAG GCACAGAATCCTAGCAGAAGCAACAAGGGCTGCTATTAAAGCTATGAACTTAGAACTTTTCGCAGAAAGACCTGGAAATG TATTAACAGCAATAAAGGTACCTCATAATGTTAATGGTGAAGGTATAGTTAAATTTTTGAGAGATGAATGGGGTGTTACC TTTGCAGGCGGACAATCGCAATTAAAAGGAAAAATAATAAGAATTGCCCACCTTGGTTACATGTCAAAATTTGATGTCAT CATTGCTGTAAGTGCTTTAGAAATGGCTTTTAACAAATTCGGCTTCGAAGTTGAACTTGGCAAAGGGGTAAAAGCTGCCG AAGAAGTTTTCATGAAAGAGGGGGTTTAA
Upstream 100 bases:
>100_bases CCAAAATAAAAAGGATAAAAAATATCCGTATTTGTACTTTAAAAAGTATGGTAAAATAAAAATAAGAAAACTTTCACAAT TTTTTAGAGGAGGGATTCAA
Downstream 100 bases:
>100_bases ATTACTATGAAAATTCATATAAATGACCCTTTGGATGAAAATGCCTTAAAAAAATTACAAAACGAATTACCTGATCTTGA AATTACTTCGGAACACCTCG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Tritium exchange subunit [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAKLVRKNYLMAPGPTPVPIDLLLEGAKDTIHHRTPQYLEIQSTALENLKYLFQTKNNVYTLAASGTGVMEAAVANLISP GDTAIAVNGGKFGERWCELCKAYDANLVEIDIEWGKYVRVEQIKKALEEHPETKAVFTTISETSTGVVHPIKEIAEIVKE TDAVLVVDAISGMLAEPLKMDDWNIDVVVTGVQKGFMMPPGVAMIALSDKAMKVVENSNNRRYYFDLRAYKKSFPDSPYT PPVNLVYQLAKATESLKEETIENVWERHRILAEATRAAIKAMNLELFAERPGNVLTAIKVPHNVNGEGIVKFLRDEWGVT FAGGQSQLKGKIIRIAHLGYMSKFDVIIAVSALEMAFNKFGFEVELGKGVKAAEEVFMKEGV
Sequences:
>Translated_382_residues MAKLVRKNYLMAPGPTPVPIDLLLEGAKDTIHHRTPQYLEIQSTALENLKYLFQTKNNVYTLAASGTGVMEAAVANLISP GDTAIAVNGGKFGERWCELCKAYDANLVEIDIEWGKYVRVEQIKKALEEHPETKAVFTTISETSTGVVHPIKEIAEIVKE TDAVLVVDAISGMLAEPLKMDDWNIDVVVTGVQKGFMMPPGVAMIALSDKAMKVVENSNNRRYYFDLRAYKKSFPDSPYT PPVNLVYQLAKATESLKEETIENVWERHRILAEATRAAIKAMNLELFAERPGNVLTAIKVPHNVNGEGIVKFLRDEWGVT FAGGQSQLKGKIIRIAHLGYMSKFDVIIAVSALEMAFNKFGFEVELGKGVKAAEEVFMKEGV >Mature_381_residues AKLVRKNYLMAPGPTPVPIDLLLEGAKDTIHHRTPQYLEIQSTALENLKYLFQTKNNVYTLAASGTGVMEAAVANLISPG DTAIAVNGGKFGERWCELCKAYDANLVEIDIEWGKYVRVEQIKKALEEHPETKAVFTTISETSTGVVHPIKEIAEIVKET DAVLVVDAISGMLAEPLKMDDWNIDVVVTGVQKGFMMPPGVAMIALSDKAMKVVENSNNRRYYFDLRAYKKSFPDSPYTP PVNLVYQLAKATESLKEETIENVWERHRILAEATRAAIKAMNLELFAERPGNVLTAIKVPHNVNGEGIVKFLRDEWGVTF AGGQSQLKGKIIRIAHLGYMSKFDVIIAVSALEMAFNKFGFEVELGKGVKAAEEVFMKEGV
Specific function: Soluble hydrogenase catalyzes both production and consumption of hydrogen from suitable artificial electron donors or acceptors. This subunit catalyzes the tritium-exchange activity [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=348, Percent_Identity=28.448275862069, Blast_Score=165, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17536281, Length=354, Percent_Identity=31.0734463276836, Blast_Score=161, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6321079, Length=363, Percent_Identity=26.9972451790634, Blast_Score=117, Evalue=3e-27, Organism=Drosophila melanogaster, GI17530823, Length=376, Percent_Identity=27.1276595744681, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 42292; Mature: 42161
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLVRKNYLMAPGPTPVPIDLLLEGAKDTIHHRTPQYLEIQSTALENLKYLFQTKNNVY CCCHHHCCEEECCCCCCCCHHHEECCCHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCEE TLAASGTGVMEAAVANLISPGDTAIAVNGGKFGERWCELCKAYDANLVEIDIEWGKYVRV EEEECCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEH EQIKKALEEHPETKAVFTTISETSTGVVHPIKEIAEIVKETDAVLVVDAISGMLAEPLKM HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCC DDWNIDVVVTGVQKGFMMPPGVAMIALSDKAMKVVENSNNRRYYFDLRAYKKSFPDSPYT CCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCC PPVNLVYQLAKATESLKEETIENVWERHRILAEATRAAIKAMNLELFAERPGNVLTAIKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEC PHNVNGEGIVKFLRDEWGVTFAGGQSQLKGKIIRIAHLGYMSKFDVIIAVSALEMAFNKF CCCCCHHHHHHHHHHHCCEEEECCCHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC GFEVELGKGVKAAEEVFMKEGV CCEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure AKLVRKNYLMAPGPTPVPIDLLLEGAKDTIHHRTPQYLEIQSTALENLKYLFQTKNNVY CCHHHCCEEECCCCCCCCHHHEECCCHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCEE TLAASGTGVMEAAVANLISPGDTAIAVNGGKFGERWCELCKAYDANLVEIDIEWGKYVRV EEEECCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEH EQIKKALEEHPETKAVFTTISETSTGVVHPIKEIAEIVKETDAVLVVDAISGMLAEPLKM HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCC DDWNIDVVVTGVQKGFMMPPGVAMIALSDKAMKVVENSNNRRYYFDLRAYKKSFPDSPYT CCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCC PPVNLVYQLAKATESLKEETIENVWERHRILAEATRAAIKAMNLELFAERPGNVLTAIKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEC PHNVNGEGIVKFLRDEWGVTFAGGQSQLKGKIIRIAHLGYMSKFDVIIAVSALEMAFNKF CCCCCHHHHHHHHHHHCCEEEECCCHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC GFEVELGKGVKAAEEVFMKEGV CCEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2513553 [H]