BacMap

Definition	Petrotoga mobilis SJ95 chromosome, complete genome.
Accession	NC_010003
Length	2,169,548

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The map label for this gene is fbpC1 [H]

Identifier: 160901701

GI number: 160901701

Start: 216432

End: 217076

Strand: Direct

Name: fbpC1 [H]

Synonym: Pmob_0213

Alternate gene names: 160901701

Gene position: 216432-217076 (Clockwise)

Preceding gene: 160901679

Following gene: 160901702

Centisome position: 9.98

GC content: 27.91

Gene sequence:

>645_bases
TTGATCGAATTTAAAAATGTTTCAAAAAAATTCCAAGATAAGTACGTTCTAAGAAATTTTAATCTCAAGGTTCAAGAAGG
GAGTAAAACTCTTATCTTTGGAAAATCCGGAATTGGAAAAACCACTATTTTTAGATTACTTTTAGGATTCATTAAACCAG
ATGAAGGACAATTACTATACAAAAATGAAGAGTTGAATGGTAAAAATGTATGGGATTTAAGAAGAGATGCTGTGTACATC
GGGCAGGAATTAGATATTTCTGATGGAACCGTAAGAGAAATAATTCGTACTATATTGAATTATAAAATAAATCTCAAAGT
ACCTTTTGAAGAATCAAAATTAATAAAATTATTTGATTTTTTTGAACTACCAGCAAATATTTTAGATAAAGACTTCCAAT
CTCTTTCAGGTGGAGAAAAACAAAGAGTTTTGATATCTATTTTTACACTTTTAAACAAAAAATTATACTTACTAGATGAG
ATTACCTCTTCTCTGGATAGAGAAATGAAAAATAAAGTCATAGAATATTTACTATCAAAAAAAGAGTGGACTTTGATTGC
AATATCTCATGATCAGGAATGGTTAAATAAAGAAGGTTTGAATATAATAGAAATGGGAGGGAATAATAATGGAACCTACA
ACTGA

Upstream 100 bases:

>100_bases
AATAGAAAAAACTGACATCTTTATTGACAATTTGAAAAAAAGAGTTATAATTACAATATCGATTTCCGATATCGACATTA
GATATAAGGAGGGAATAATT

Downstream 100 bases:

>100_bases
TATTTCTTTATTTTCACTTGCAATGGCGTATTTGTTAATATTTTTCCCCATTATCTTGAGTTATATTTTTAATTTAAAAA
TTACCCGAGATACTTTAATT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIEFKNVSKKFQDKYVLRNFNLKVQEGSKTLIFGKSGIGKTTIFRLLLGFIKPDEGQLLYKNEELNGKNVWDLRRDAVYI
GQELDISDGTVREIIRTILNYKINLKVPFEESKLIKLFDFFELPANILDKDFQSLSGGEKQRVLISIFTLLNKKLYLLDE
ITSSLDREMKNKVIEYLLSKKEWTLIAISHDQEWLNKEGLNIIEMGGNNNGTYN

Sequences:

>Translated_214_residues
MIEFKNVSKKFQDKYVLRNFNLKVQEGSKTLIFGKSGIGKTTIFRLLLGFIKPDEGQLLYKNEELNGKNVWDLRRDAVYI
GQELDISDGTVREIIRTILNYKINLKVPFEESKLIKLFDFFELPANILDKDFQSLSGGEKQRVLISIFTLLNKKLYLLDE
ITSSLDREMKNKVIEYLLSKKEWTLIAISHDQEWLNKEGLNIIEMGGNNNGTYN
>Mature_214_residues
MIEFKNVSKKFQDKYVLRNFNLKVQEGSKTLIFGKSGIGKTTIFRLLLGFIKPDEGQLLYKNEELNGKNVWDLRRDAVYI
GQELDISDGTVREIIRTILNYKINLKVPFEESKLIKLFDFFELPANILDKDFQSLSGGEKQRVLISIFTLLNKKLYLLDE
ITSSLDREMKNKVIEYLLSKKEWTLIAISHDQEWLNKEGLNIIEMGGNNNGTYN

Specific function: Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system [H]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=201, Percent_Identity=32.3383084577114, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI4505771, Length=200, Percent_Identity=31.5, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9961252, Length=200, Percent_Identity=31.5, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9961250, Length=200, Percent_Identity=31.5, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI255708477, Length=203, Percent_Identity=31.5270935960591, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI148612844, Length=202, Percent_Identity=30.6930693069307, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI21536378, Length=188, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1786698, Length=200, Percent_Identity=29.5, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1789891, Length=192, Percent_Identity=31.7708333333333, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081709, Length=200, Percent_Identity=31, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787143, Length=225, Percent_Identity=29.3333333333333, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788450, Length=198, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=26.1682242990654, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789672, Length=197, Percent_Identity=27.4111675126904, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787370, Length=199, Percent_Identity=28.643216080402, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=25.2577319587629, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788225, Length=206, Percent_Identity=24.7572815533981, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789751, Length=201, Percent_Identity=26.3681592039801, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1787041, Length=209, Percent_Identity=25.3588516746411, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786975, Length=200, Percent_Identity=25.5, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787547, Length=195, Percent_Identity=24.1025641025641, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI2367384, Length=224, Percent_Identity=26.3392857142857, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789593, Length=168, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=33.4821428571429, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193211015, Length=197, Percent_Identity=32.48730964467, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193211017, Length=197, Percent_Identity=32.48730964467, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71996809, Length=197, Percent_Identity=32.48730964467, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25146777, Length=210, Percent_Identity=31.4285714285714, Blast_Score=77, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=210, Percent_Identity=30, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=200, Percent_Identity=32, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=219, Percent_Identity=28.310502283105, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=197, Percent_Identity=30.9644670050761, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=200, Percent_Identity=30.5, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=216, Percent_Identity=28.2407407407407, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=183, Percent_Identity=30.6010928961749, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=182, Percent_Identity=29.6703296703297, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=199, Percent_Identity=28.1407035175879, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=202, Percent_Identity=29.7029702970297, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=195, Percent_Identity=28.2051282051282, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=216, Percent_Identity=30.5555555555556, Blast_Score=86, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6323217, Length=204, Percent_Identity=28.4313725490196, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=198, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6320339, Length=203, Percent_Identity=26.6009852216749, Blast_Score=69, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6320296, Length=182, Percent_Identity=31.3186813186813, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322640, Length=186, Percent_Identity=27.4193548387097, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24659289, Length=198, Percent_Identity=32.3232323232323, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17136662, Length=204, Percent_Identity=28.4313725490196, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI85726357, Length=185, Percent_Identity=31.8918918918919, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015853
- InterPro:   IPR003593
- InterPro:   IPR008995
- InterPro:   IPR013611 [H]

Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]

EC number: =3.6.3.30 [H]

Molecular weight: Translated: 24862; Mature: 24862

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFKNVSKKFQDKYVLRNFNLKVQEGSKTLIFGKSGIGKTTIFRLLLGFIKPDEGQLLY
CCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
KNEELNGKNVWDLRRDAVYIGQELDISDGTVREIIRTILNYKINLKVPFEESKLIKLFDF
ECCCCCCCCCHHHHHCEEEECCEECCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
FELPANILDKDFQSLSGGEKQRVLISIFTLLNKKLYLLDEITSSLDREMKNKVIEYLLSK
HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEWTLIAISHDQEWLNKEGLNIIEMGGNNNGTYN
CCEEEEEEECCHHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MIEFKNVSKKFQDKYVLRNFNLKVQEGSKTLIFGKSGIGKTTIFRLLLGFIKPDEGQLLY
CCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
KNEELNGKNVWDLRRDAVYIGQELDISDGTVREIIRTILNYKINLKVPFEESKLIKLFDF
ECCCCCCCCCHHHHHCEEEECCEECCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
FELPANILDKDFQSLSGGEKQRVLISIFTLLNKKLYLLDEITSSLDREMKNKVIEYLLSK
HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEWTLIAISHDQEWLNKEGLNIIEMGGNNNGTYN
CCEEEEEEECCHHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA