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The map label for this gene is rsmD [H]

Identifier: 160901679

GI number: 160901679

Start: 191399

End: 191947

Strand: Direct

Name: rsmD [H]

Synonym: Pmob_0191

Alternate gene names: 160901679

Gene position: 191399-191947 (Clockwise)

Preceding gene: 160901678

Following gene: 160901701

Centisome position: 8.82

GC content: 28.96

Gene sequence:

>549_bases
ATGGCTTTGAAGATTGAAAGCGGCAAATTTAAGAATACCAATATAGAAACAGTTGATGATCGTAGGACGAGATATACTCC
CGCTACTTTAAGAAGAGCTCTGATAAGCATTTTTGATTTTACAGGAGCTAATTTTTTAGAATTTTTTGCAGGTAGCGGCA
TAATGAGTTTTGAAGTTTTAAGTAATGGGGCAAAAAGTTCTACAATGGTTGATATTTCGACTAAGGCCGTGAGCTCGATT
TTAAAAAACGCTGAATCTTTAGGGGTACTAAATAAAATAAAAGTTATAAAATCAGATTTTAGAAAATCTATTACAAAACT
TTCAAATGAACAGTTTGATTACATATTTGCTGATCCACCTTTTAATAACAGTTATGTCCAAGAATTTTTGAAATTCATAG
ATTCAAATGTATTTTTAATTAGAAACGGCGGCTACATCATTATTGAAAAATATAAGAATGAAAAATCTGATTATATACCT
AAAAATTTAATTAGAGAAGAAGTAAGAGATTACGGTGATATTGAAATTCTAATCTTTTTTAAACCTTAA

Upstream 100 bases:

>100_bases
CAGCTTCCCAAGCTGGGAGTCGCGGGTTCGAGTCCCGTCATCCGCTCCAAAAACGAAAGGGGCTTAATGAAGCCCTTCTT
TGTTTGTATGAGGTGTAAAA

Downstream 100 bases:

>100_bases
AAAAAGGGCCTTAATAAGGCCCTAATTTGGAAATGAATTCTTCCGGGGACAGAACACTCCAGGAGGGAGGGTAACCTACA
AAAGTGCTCTGTAGAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m2G966 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase [H]

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MALKIESGKFKNTNIETVDDRRTRYTPATLRRALISIFDFTGANFLEFFAGSGIMSFEVLSNGAKSSTMVDISTKAVSSI
LKNAESLGVLNKIKVIKSDFRKSITKLSNEQFDYIFADPPFNNSYVQEFLKFIDSNVFLIRNGGYIIIEKYKNEKSDYIP
KNLIREEVRDYGDIEILIFFKP

Sequences:

>Translated_182_residues
MALKIESGKFKNTNIETVDDRRTRYTPATLRRALISIFDFTGANFLEFFAGSGIMSFEVLSNGAKSSTMVDISTKAVSSI
LKNAESLGVLNKIKVIKSDFRKSITKLSNEQFDYIFADPPFNNSYVQEFLKFIDSNVFLIRNGGYIIIEKYKNEKSDYIP
KNLIREEVRDYGDIEILIFFKP
>Mature_181_residues
ALKIESGKFKNTNIETVDDRRTRYTPATLRRALISIFDFTGANFLEFFAGSGIMSFEVLSNGAKSSTMVDISTKAVSSIL
KNAESLGVLNKIKVIKSDFRKSITKLSNEQFDYIFADPPFNNSYVQEFLKFIDSNVFLIRNGGYIIIEKYKNEKSDYIPK
NLIREEVRDYGDIEILIFFKP

Specific function: Specifically methylates the guanosine in position 966 of 16S rRNA in the assembled 30S particle [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: =2.1.1.171 [H]

Molecular weight: Translated: 20817; Mature: 20686

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKIESGKFKNTNIETVDDRRTRYTPATLRRALISIFDFTGANFLEFFAGSGIMSFEVL
CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHH
SNGAKSSTMVDISTKAVSSILKNAESLGVLNKIKVIKSDFRKSITKLSNEQFDYIFADPP
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
FNNSYVQEFLKFIDSNVFLIRNGGYIIIEKYKNEKSDYIPKNLIREEVRDYGDIEILIFF
CCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE
KP
CC
>Mature Secondary Structure 
ALKIESGKFKNTNIETVDDRRTRYTPATLRRALISIFDFTGANFLEFFAGSGIMSFEVL
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHH
SNGAKSSTMVDISTKAVSSILKNAESLGVLNKIKVIKSDFRKSITKLSNEQFDYIFADPP
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
FNNSYVQEFLKFIDSNVFLIRNGGYIIIEKYKNEKSDYIPKNLIREEVRDYGDIEILIFF
CCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE
KP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]