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The map label for this gene is yjkA [H]

Identifier: 160901702

GI number: 160901702

Start: 217060

End: 217851

Strand: Direct

Name: yjkA [H]

Synonym: Pmob_0214

Alternate gene names: 160901702

Gene position: 217060-217851 (Clockwise)

Preceding gene: 160901701

Following gene: 160901703

Centisome position: 10.0

GC content: 31.94

Gene sequence:

>792_bases
ATGGAACCTACAACTGATATTTCTTTATTTTCACTTGCAATGGCGTATTTGTTAATATTTTTCCCCATTATCTTGAGTTA
TATTTTTAATTTAAAAATTACCCGAGATACTTTAATTTCAACATTCAGAATGAGCATTCAGCTTTTCATCATGTCTTTAA
TTTTAGTATATCTTTTCCAATTTGATTATACATGGTTGAATATAGGCTGGTTATTTTTTATGATTTCTTTTGCTGTATTT
CGAGTTATTGGTAGCAGCGGTTTAAATTTCAAAAGGTTCGTTTGGCCAGTATTTTTTGCCCTTGGTATTTCTAATTTTAT
TGTACTCTTTTACTTCGATTTTATAATTTTAAGATTGGATGATATTTTCACCGCAAGATATTTCGTTGTCCTAGGTGGAA
TGCTCTTAGGTAACGCTTTAACAGGAGATATTATTGGAATTAGTAATTTTTATAAAGATATAGAAAGAAATAAACAACGA
TATTTTTTTGCTTTGGGAAATGGGGCTACCGTTTATGAAGCCACACTTCCATATTTAAGGAACGCATTAATATCTGCCCT
TAGACCAACCATAGCAAGTATGGCTACAGTTGGAATCGTGTATCTGCCTGGAATGATGACAGGTCAGATTTTGGGAGGTG
CATCTCCACAAACAGCTATAAAATACCAAATTGCCATATATGTAGCTATTTTAACATCGGTTTCTCTTTCTGTAACCTTA
ACGATATTATTCACAATGAAAAGTAGCTTCGATGAGTATGGGATACTTCGCCAAGATATCTTTAAAAAATAA

Upstream 100 bases:

>100_bases
TTACTATCAAAAAAAGAGTGGACTTTGATTGCAATATCTCATGATCAGGAATGGTTAAATAAAGAAGGTTTGAATATAAT
AGAAATGGGAGGGAATAATA

Downstream 100 bases:

>100_bases
GCAAAGGAAGGTGTTCTAAAACGAAAAAAACAGCTATTGGTTTTATAGTTGCTATGGGAATTGTGAGTTTATTCGCAGAC
ATCACACATGAAGGAGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEPTTDISLFSLAMAYLLIFFPIILSYIFNLKITRDTLISTFRMSIQLFIMSLILVYLFQFDYTWLNIGWLFFMISFAVF
RVIGSSGLNFKRFVWPVFFALGISNFIVLFYFDFIILRLDDIFTARYFVVLGGMLLGNALTGDIIGISNFYKDIERNKQR
YFFALGNGATVYEATLPYLRNALISALRPTIASMATVGIVYLPGMMTGQILGGASPQTAIKYQIAIYVAILTSVSLSVTL
TILFTMKSSFDEYGILRQDIFKK

Sequences:

>Translated_263_residues
MEPTTDISLFSLAMAYLLIFFPIILSYIFNLKITRDTLISTFRMSIQLFIMSLILVYLFQFDYTWLNIGWLFFMISFAVF
RVIGSSGLNFKRFVWPVFFALGISNFIVLFYFDFIILRLDDIFTARYFVVLGGMLLGNALTGDIIGISNFYKDIERNKQR
YFFALGNGATVYEATLPYLRNALISALRPTIASMATVGIVYLPGMMTGQILGGASPQTAIKYQIAIYVAILTSVSLSVTL
TILFTMKSSFDEYGILRQDIFKK
>Mature_263_residues
MEPTTDISLFSLAMAYLLIFFPIILSYIFNLKITRDTLISTFRMSIQLFIMSLILVYLFQFDYTWLNIGWLFFMISFAVF
RVIGSSGLNFKRFVWPVFFALGISNFIVLFYFDFIILRLDDIFTARYFVVLGGMLLGNALTGDIIGISNFYKDIERNKQR
YFFALGNGATVYEATLPYLRNALISALRPTIASMATVGIVYLPGMMTGQILGGASPQTAIKYQIAIYVAILTSVSLSVTL
TILFTMKSSFDEYGILRQDIFKK

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=260, Percent_Identity=30.3846153846154, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 29931; Mature: 29931

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPTTDISLFSLAMAYLLIFFPIILSYIFNLKITRDTLISTFRMSIQLFIMSLILVYLFQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDYTWLNIGWLFFMISFAVFRVIGSSGLNFKRFVWPVFFALGISNFIVLFYFDFIILRLD
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIFTARYFVVLGGMLLGNALTGDIIGISNFYKDIERNKQRYFFALGNGATVYEATLPYLR
HHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHH
NALISALRPTIASMATVGIVYLPGMMTGQILGGASPQTAIKYQIAIYVAILTSVSLSVTL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TILFTMKSSFDEYGILRQDIFKK
HHHHHHHHCCHHHCHHHHHHCCC
>Mature Secondary Structure
MEPTTDISLFSLAMAYLLIFFPIILSYIFNLKITRDTLISTFRMSIQLFIMSLILVYLFQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDYTWLNIGWLFFMISFAVFRVIGSSGLNFKRFVWPVFFALGISNFIVLFYFDFIILRLD
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIFTARYFVVLGGMLLGNALTGDIIGISNFYKDIERNKQRYFFALGNGATVYEATLPYLR
HHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHH
NALISALRPTIASMATVGIVYLPGMMTGQILGGASPQTAIKYQIAIYVAILTSVSLSVTL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TILFTMKSSFDEYGILRQDIFKK
HHHHHHHHCCHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]