Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877553
Identifier: 160877553
GI number: 160877553
Start: 5261541
End: 5262278
Strand: Reverse
Name: 160877553
Synonym: Sbal195_4452
Alternate gene names: NA
Gene position: 5262278-5261541 (Counterclockwise)
Preceding gene: 160877556
Following gene: 160877551
Centisome position: 98.41
GC content: 44.17
Gene sequence:
>738_bases ATGAGACGATTCTTTGCTATTTTTTGCTTACTTTTAGCCATGTTACCTGTATCCATCTATGCCGCCCAGCCGATAGTTGT CAATGTGGCGACGGCTTCGTGGGAGGATTTTGCCAATCGTGATGAAACGGGTTACTACTTCGAGTTACTCCAACGGATTT TCCCCGAGCCAGAATGGCAACTCAAGGTGCAGTTTATGCCCTTTGCCCGCAGTTTATATCTTGTTGAGCACAATCGTACC GATATCACCCTCAGTGTTTATAAGGGAGATACTAAAAAGGCGCTGCTAACTGAGAATACGGTTGAAGTAGATTCTATCGA TGTAGCGGTCACCCCCGAGTTAGCGGCGACTTGGACAGGGCTTGAAAGTCTATCCCATAAAAGGGTTCAGGCCATGTTGG CCTATCGATACAATATGCTGACGCCTGTACCTATGTACTATGAAGAAAGCAGCGATATGTTGACTATGCTCAATAGCTTA AACGCAGGACGCATAGATGCCGTGTTGGATTACAAACCTAATTTGCTTATGTATGTGCCTAAGCTGAAGGCGCCACAAAA TTTTGTGATTATTCAAGGCGTACTCAAGGCCGAAACCTATTTTGCCTTTGCAAACACTGAAAAAGGCCAGATGCTGAAAC AACATTTTGACCTTGCACATAAGCGTTTAATCGATTCGGGAGAGCAGGACAGGCTTTATCTTGAAATACTTGAAAAAAGA AAGGCTGATGATGAATAG
Upstream 100 bases:
>100_bases CCATTATAGTGGTCGAGTTTTAAGATGCAAGCCTGCTGTTTAAATGTACGCATAGAATGAAAACTCTTCTACACTTTGTG TACGTCGAAGGAGGATAACC
Downstream 100 bases:
>100_bases GCCTTAAATTTATTCGGTTTATTACATTTCGAACAGAATCGACATGATAGTCGCGAGTTTATTTTCAAGCTCTTGCCACT CAGCTTCGGGCTCTGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MRRFFAIFCLLLAMLPVSIYAAQPIVVNVATASWEDFANRDETGYYFELLQRIFPEPEWQLKVQFMPFARSLYLVEHNRT DITLSVYKGDTKKALLTENTVEVDSIDVAVTPELAATWTGLESLSHKRVQAMLAYRYNMLTPVPMYYEESSDMLTMLNSL NAGRIDAVLDYKPNLLMYVPKLKAPQNFVIIQGVLKAETYFAFANTEKGQMLKQHFDLAHKRLIDSGEQDRLYLEILEKR KADDE
Sequences:
>Translated_245_residues MRRFFAIFCLLLAMLPVSIYAAQPIVVNVATASWEDFANRDETGYYFELLQRIFPEPEWQLKVQFMPFARSLYLVEHNRT DITLSVYKGDTKKALLTENTVEVDSIDVAVTPELAATWTGLESLSHKRVQAMLAYRYNMLTPVPMYYEESSDMLTMLNSL NAGRIDAVLDYKPNLLMYVPKLKAPQNFVIIQGVLKAETYFAFANTEKGQMLKQHFDLAHKRLIDSGEQDRLYLEILEKR KADDE >Mature_245_residues MRRFFAIFCLLLAMLPVSIYAAQPIVVNVATASWEDFANRDETGYYFELLQRIFPEPEWQLKVQFMPFARSLYLVEHNRT DITLSVYKGDTKKALLTENTVEVDSIDVAVTPELAATWTGLESLSHKRVQAMLAYRYNMLTPVPMYYEESSDMLTMLNSL NAGRIDAVLDYKPNLLMYVPKLKAPQNFVIIQGVLKAETYFAFANTEKGQMLKQHFDLAHKRLIDSGEQDRLYLEILEKR KADDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28297; Mature: 28297
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFFAIFCLLLAMLPVSIYAAQPIVVNVATASWEDFANRDETGYYFELLQRIFPEPEWQ CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCCCEE LKVQFMPFARSLYLVEHNRTDITLSVYKGDTKKALLTENTVEVDSIDVAVTPELAATWTG EEEEEECCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCEEEEEEEEEECCHHHHHHHH LESLSHKRVQAMLAYRYNMLTPVPMYYEESSDMLTMLNSLNAGRIDAVLDYKPNLLMYVP HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEC KLKAPQNFVIIQGVLKAETYFAFANTEKGQMLKQHFDLAHKRLIDSGEQDRLYLEILEKR CCCCCCCEEEEEEEEHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH KADDE CCCCC >Mature Secondary Structure MRRFFAIFCLLLAMLPVSIYAAQPIVVNVATASWEDFANRDETGYYFELLQRIFPEPEWQ CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCCCEE LKVQFMPFARSLYLVEHNRTDITLSVYKGDTKKALLTENTVEVDSIDVAVTPELAATWTG EEEEEECCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCEEEEEEEEEECCHHHHHHHH LESLSHKRVQAMLAYRYNMLTPVPMYYEESSDMLTMLNSLNAGRIDAVLDYKPNLLMYVP HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEC KLKAPQNFVIIQGVLKAETYFAFANTEKGQMLKQHFDLAHKRLIDSGEQDRLYLEILEKR CCCCCCCEEEEEEEEHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH KADDE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA