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The map label for this gene is cirA [H]

Identifier: 160877551

GI number: 160877551

Start: 5257432

End: 5259735

Strand: Reverse

Name: cirA [H]

Synonym: Sbal195_4450

Alternate gene names: 160877551

Gene position: 5259735-5257432 (Counterclockwise)

Preceding gene: 160877553

Following gene: 160877550

Centisome position: 98.36

GC content: 50.52

Gene sequence:

>2304_bases
ATGATTACCACGAATACCCTCTTTAGAGTGTCATCTTTAGCCATAGCTATTGGTCTTAGTTTTACTGTTCAAGCCGATGA
AATCGCCCGTGATCCGCGACTCAATATCAATGAAGTGATCGTCGTGCATGGTGACGGCGGAGAAGCCAGTGAAATGGCGA
CGACCCATTGGAGCATTAGTGAAGAAGAGATCCGCGCAACCGGAGCGCAAAGCCTAGATCAAGTCTTAAAGAATGTGCCG
GGTGTGTACATTCGTGTTGGTGGTGACGGAACACCAAGGGTCGATATTCGTGGTTTTAAAACTCGCCATGTGACCTTGTT
GGTCAATGGTGTGCCTATGAGCAGCGCCGACGATGGTCAGTTCGACCCGAGTATCATTCCCACAAGCCAAATTGCCTCGG
TAGAAGTGTCTGTCGGCCCGACATCTGTGCTTTACGGTCCAAGTGGTGCGGGTGGCGTCATCAACATTATTACCAAGCAG
GGCAGCACGGCGCCAGCACTGGCAGGGCGCCTCGAAGCGGGTAAAGACAATACATTTAATGGCGATATCAGCGCCGCAGG
TTCGGGTGACGATTGGCAAGGTTTGGTCAGTGTCAGTCGGCAGCAAACCGACGGTTTCCCTATGTCGAATGACTTTGAGC
CGACACAATACCAAGATGGTGAGTTGCGCGTTAACTCGGATAAAGAAGTCACTAACGTTTATGCCCAAGGCAGTTACTGG
TTATCCGACAAGACCCAATTGATTGCCAATATGGCGCTGCGCAGCGGCGAATGGGGAAAACCTGCCCGTGACGGTACTGG
CAGCGGCAAGTTGAAATTCGAACGTACCGATGATTATGACGCGCATACTTTCCAACTGGGGTTAGCACATCAGTTTGATG
ACACTTTCACCCTACGTGGCTTTGGCTATCATAATCAAAGCGATACCTTAGAAGCCTCCTATGCCGATGAAACCTATCAG
GCAGTGACGCTGTCGCAAGATGGGCGCTCGGTTGTGCAAGGCATCAATCTGCAGTTAATCACAGACTTGCATACCGCGGG
TTTATTCACGACCTCAGTCATTGCCGAGAAACAAAGCTGGAAGTCAGTCGTCGATACTTATACGGCTAATACAGGCAGCA
ATAATGGTGGCACTATAGGTTCTGGTGGTGGAACTGGCACAGGCGGCGGAACTGGCACAGGCGGTGGAACAGGTACAGGT
GGTGGAACTGGCACAGGCGGCGGAACTGGCACAGGTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAGGTGGTGGAAC
AGGTACAGGTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAG
GTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAGGTGGTGGAACAGGTACAGGTGGTGGA
ACAGGTACAGGTGGCGCCGAGAACTTAAATGATTCCGCCTGGCTATATACGGCCGCGGCTGAGTATCAGTACCAATCTGA
GCTGCAGTACGGCTTTACCTTAGGTGGCGCTTACCATTCACTCGACACCACAGATAGTACCGATGGCAACTATTCGGCCA
TGGCCTCCAGTTATTGGCAGGCGGCGCAGGATTCTCGTTTAAGCTTAAGTGTGGCACGTAAAGTGCGCTTCCCGTCTATG
GTGAACTTGTATTCGCAGCTATCTGGTAATCGTGATTTAGAAGCCGAAGAGTCTAAGCATGTGGAGCTGGGTTTAGAGCA
GAATCTGCCGGCGAGTACCGATTTCTCCCTTTATGGCTATTACACTGATGCGAAAAATTACATCGCCAAGGATGTCGATG
GTTTCTACCAAAATATGGGGCGTTATAAGTTCAAAGGGGTGGATTTTCAAATCAATAACCATGCGATTGAGCACTTAGAT
CTGAGCTTCTCCTATAGCTTCCTCGATTCAGAGGAGATAGACGGCGATGATACTTTAGATGCCTTGCAATATCGTCCACG
TCACCAGTTACGTTGGCAGATGAGTTACGAATTCCCCTTCGAGACTCAAGTTCACCTCAACGTGGAGCGTATTTTAGACC
AAGTCTATGCGACGCAGGTGAAGGTTGGCGGTCAGACGCAATATCAACAGCAGTCGTTAGACAACTACACCTTAGTGGAC
GTAAATCTGGTACAGCCATTAATTCGTGACAAGTTAGATGTTTACCTACGTGCGACTAACTTGCTGGATGAAAACTACTA
CCAGAGTGAAGCCCTGCCGCAGGCAGGACGACAGATCTTCATCGGTGTGAACTGGCAGATCTAA

Upstream 100 bases:

>100_bases
GTCGATCTGGGTTGGTTTTTAAACGTTTTCCGGTTGAGACAGAATCATCGCGGTTCACAATAGCGGGCACATCTTAAATT
TTCGACGTGACAACAATAAT

Downstream 100 bases:

>100_bases
GATGAAACTCCTAGCGCTCGAAGGCGTTAGCTTCAACTATGGCAGCCAGTTACCGACTGTATTGCAGGAGGTTAACTTGG
CGATTGGCACCGGCCAATGC

Product: TonB-dependent receptor plug

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MITTNTLFRVSSLAIAIGLSFTVQADEIARDPRLNINEVIVVHGDGGEASEMATTHWSISEEEIRATGAQSLDQVLKNVP
GVYIRVGGDGTPRVDIRGFKTRHVTLLVNGVPMSSADDGQFDPSIIPTSQIASVEVSVGPTSVLYGPSGAGGVINIITKQ
GSTAPALAGRLEAGKDNTFNGDISAAGSGDDWQGLVSVSRQQTDGFPMSNDFEPTQYQDGELRVNSDKEVTNVYAQGSYW
LSDKTQLIANMALRSGEWGKPARDGTGSGKLKFERTDDYDAHTFQLGLAHQFDDTFTLRGFGYHNQSDTLEASYADETYQ
AVTLSQDGRSVVQGINLQLITDLHTAGLFTTSVIAEKQSWKSVVDTYTANTGSNNGGTIGSGGGTGTGGGTGTGGGTGTG
GGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
TGTGGAENLNDSAWLYTAAAEYQYQSELQYGFTLGGAYHSLDTTDSTDGNYSAMASSYWQAAQDSRLSLSVARKVRFPSM
VNLYSQLSGNRDLEAEESKHVELGLEQNLPASTDFSLYGYYTDAKNYIAKDVDGFYQNMGRYKFKGVDFQINNHAIEHLD
LSFSYSFLDSEEIDGDDTLDALQYRPRHQLRWQMSYEFPFETQVHLNVERILDQVYATQVKVGGQTQYQQQSLDNYTLVD
VNLVQPLIRDKLDVYLRATNLLDENYYQSEALPQAGRQIFIGVNWQI

Sequences:

>Translated_767_residues
MITTNTLFRVSSLAIAIGLSFTVQADEIARDPRLNINEVIVVHGDGGEASEMATTHWSISEEEIRATGAQSLDQVLKNVP
GVYIRVGGDGTPRVDIRGFKTRHVTLLVNGVPMSSADDGQFDPSIIPTSQIASVEVSVGPTSVLYGPSGAGGVINIITKQ
GSTAPALAGRLEAGKDNTFNGDISAAGSGDDWQGLVSVSRQQTDGFPMSNDFEPTQYQDGELRVNSDKEVTNVYAQGSYW
LSDKTQLIANMALRSGEWGKPARDGTGSGKLKFERTDDYDAHTFQLGLAHQFDDTFTLRGFGYHNQSDTLEASYADETYQ
AVTLSQDGRSVVQGINLQLITDLHTAGLFTTSVIAEKQSWKSVVDTYTANTGSNNGGTIGSGGGTGTGGGTGTGGGTGTG
GGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
TGTGGAENLNDSAWLYTAAAEYQYQSELQYGFTLGGAYHSLDTTDSTDGNYSAMASSYWQAAQDSRLSLSVARKVRFPSM
VNLYSQLSGNRDLEAEESKHVELGLEQNLPASTDFSLYGYYTDAKNYIAKDVDGFYQNMGRYKFKGVDFQINNHAIEHLD
LSFSYSFLDSEEIDGDDTLDALQYRPRHQLRWQMSYEFPFETQVHLNVERILDQVYATQVKVGGQTQYQQQSLDNYTLVD
VNLVQPLIRDKLDVYLRATNLLDENYYQSEALPQAGRQIFIGVNWQI
>Mature_767_residues
MITTNTLFRVSSLAIAIGLSFTVQADEIARDPRLNINEVIVVHGDGGEASEMATTHWSISEEEIRATGAQSLDQVLKNVP
GVYIRVGGDGTPRVDIRGFKTRHVTLLVNGVPMSSADDGQFDPSIIPTSQIASVEVSVGPTSVLYGPSGAGGVINIITKQ
GSTAPALAGRLEAGKDNTFNGDISAAGSGDDWQGLVSVSRQQTDGFPMSNDFEPTQYQDGELRVNSDKEVTNVYAQGSYW
LSDKTQLIANMALRSGEWGKPARDGTGSGKLKFERTDDYDAHTFQLGLAHQFDDTFTLRGFGYHNQSDTLEASYADETYQ
AVTLSQDGRSVVQGINLQLITDLHTAGLFTTSVIAEKQSWKSVVDTYTANTGSNNGGTIGSGGGTGTGGGTGTGGGTGTG
GGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
TGTGGAENLNDSAWLYTAAAEYQYQSELQYGFTLGGAYHSLDTTDSTDGNYSAMASSYWQAAQDSRLSLSVARKVRFPSM
VNLYSQLSGNRDLEAEESKHVELGLEQNLPASTDFSLYGYYTDAKNYIAKDVDGFYQNMGRYKFKGVDFQINNHAIEHLD
LSFSYSFLDSEEIDGDDTLDALQYRPRHQLRWQMSYEFPFETQVHLNVERILDQVYATQVKVGGQTQYQQQSLDNYTLVD
VNLVQPLIRDKLDVYLRATNLLDENYYQSEALPQAGRQIFIGVNWQI

Specific function: Not yet known. Postulated to participate in iron transport. Outer membrane receptor for colicins IA and IB [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=166, Percent_Identity=32.5301204819277, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1786798, Length=172, Percent_Identity=30.2325581395349, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 80597; Mature: 80597

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTNTLFRVSSLAIAIGLSFTVQADEIARDPRLNINEVIVVHGDGGEASEMATTHWSIS
CCCCCHHHHHHHEEEEEEEEEEEEHHHHCCCCCCCCCEEEEEECCCCCHHHEEEEECCCC
EEEIRATGAQSLDQVLKNVPGVYIRVGGDGTPRVDIRGFKTRHVTLLVNGVPMSSADDGQ
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCC
FDPSIIPTSQIASVEVSVGPTSVLYGPSGAGGVINIITKQGSTAPALAGRLEAGKDNTFN
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCC
GDISAAGSGDDWQGLVSVSRQQTDGFPMSNDFEPTQYQDGELRVNSDKEVTNVYAQGSYW
CCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCEEE
LSDKTQLIANMALRSGEWGKPARDGTGSGKLKFERTDDYDAHTFQLGLAHQFDDTFTLRG
ECCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEE
FGYHNQSDTLEASYADETYQAVTLSQDGRSVVQGINLQLITDLHTAGLFTTSVIAEKQSW
ECCCCCCCCEEECCCCCCEEEEEECCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHH
KSVVDTYTANTGSNNGGTIGSGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGTGGAENLNDSAWLYTAAAEYQYQSELQYGFTLGGAYHSLDTTDSTDGNYSAMASSYWQ
CCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCEEECCEEEECCCCCCCCCCHHHHHHHHHH
AAQDSRLSLSVARKVRFPSMVNLYSQLSGNRDLEAEESKHVELGLEQNLPASTDFSLYGY
HHCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE
YTDAKNYIAKDVDGFYQNMGRYKFKGVDFQINNHAIEHLDLSFSYSFLDSEEIDGDDTLD
EECCHHHHHHHHHHHHHHCCCEEEECEEEEECCCEEEEEEEEEEEEECCCCCCCCCCHHH
ALQYRPRHQLRWQMSYEFPFETQVHLNVERILDQVYATQVKVGGQTQYQQQSLDNYTLVD
HHHCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHEEEECCCCHHHHHCCCCEEEEE
VNLVQPLIRDKLDVYLRATNLLDENYYQSEALPQAGRQIFIGVNWQI
HHHHHHHHHHHHEEEEEEHHHHCCCHHHHHCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MITTNTLFRVSSLAIAIGLSFTVQADEIARDPRLNINEVIVVHGDGGEASEMATTHWSIS
CCCCCHHHHHHHEEEEEEEEEEEEHHHHCCCCCCCCCEEEEEECCCCCHHHEEEEECCCC
EEEIRATGAQSLDQVLKNVPGVYIRVGGDGTPRVDIRGFKTRHVTLLVNGVPMSSADDGQ
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCC
FDPSIIPTSQIASVEVSVGPTSVLYGPSGAGGVINIITKQGSTAPALAGRLEAGKDNTFN
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCC
GDISAAGSGDDWQGLVSVSRQQTDGFPMSNDFEPTQYQDGELRVNSDKEVTNVYAQGSYW
CCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCEEE
LSDKTQLIANMALRSGEWGKPARDGTGSGKLKFERTDDYDAHTFQLGLAHQFDDTFTLRG
ECCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEE
FGYHNQSDTLEASYADETYQAVTLSQDGRSVVQGINLQLITDLHTAGLFTTSVIAEKQSW
ECCCCCCCCEEECCCCCCEEEEEECCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHH
KSVVDTYTANTGSNNGGTIGSGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGTGGAENLNDSAWLYTAAAEYQYQSELQYGFTLGGAYHSLDTTDSTDGNYSAMASSYWQ
CCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCEEECCEEEECCCCCCCCCCHHHHHHHHHH
AAQDSRLSLSVARKVRFPSMVNLYSQLSGNRDLEAEESKHVELGLEQNLPASTDFSLYGY
HHCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE
YTDAKNYIAKDVDGFYQNMGRYKFKGVDFQINNHAIEHLDLSFSYSFLDSEEIDGDDTLD
EECCHHHHHHHHHHHHHHCCCEEEECEEEEECCCEEEEEEEEEEEEECCCCCCCCCCHHH
ALQYRPRHQLRWQMSYEFPFETQVHLNVERILDQVYATQVKVGGQTQYQQQSLDNYTLVD
HHHCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHEEEECCCCHHHHHCCCCEEEEE
VNLVQPLIRDKLDVYLRATNLLDENYYQSEALPQAGRQIFIGVNWQI
HHHHHHHHHHHHEEEEEEHHHHCCCHHHHHCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2644220; 9278503; 3316180; 1315732; 2160948 [H]