| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877388
Identifier: 160877388
GI number: 160877388
Start: 5065730
End: 5066206
Strand: Reverse
Name: 160877388
Synonym: Sbal195_4286
Alternate gene names: NA
Gene position: 5066206-5065730 (Counterclockwise)
Preceding gene: 160877394
Following gene: 160877387
Centisome position: 94.74
GC content: 38.36
Gene sequence:
>477_bases ATGAATACTTCAGTCATTCTCAGCTATGCGTTTATGTATTTCGTGCTGTTTGTAGCAGTGCCATTTGTTTTTGTCATGTT CGTCATGACCTGCATTAAGTTTTTTAAAGCAGGCCCCGATGAGGCAGAGCATCATGAAATGAAACTTAAACCAGTACTGT TCGATAAACAAAGTTTTAACTTTTTTAAATCGTTAAAAACCGTAGTGGAAGGCAAATACGATGTTTGCTGTAATGTCCCG CTAGACACCGTATTTGAAATGGACCAGCATGACGCTGATTTAAATCACGAGTGCCGACTAGACTATGTGTTAATAGATCA TGACTCATCTGAAGTGAAAATGGTGATCAGTGATTTTGGCAAAGAACACAACTCGCCAATGAAAAAGCTGTTTAGTAAGT TCAATATCAACTTTATTGAAATGAACCAACATAAACAGTGGGATACACAGAGCCTAAAGCAAGCGTTAGCCGTCTGA
Upstream 100 bases:
>100_bases GTTAAATGTGATCGTGTTCAAAAAAAATAAAACGCTTCACGTTAATACTAAAGTTGCGTTAAAAGAGATAACAAAAAATA AATAGGTTATTGGAGGCGTT
Downstream 100 bases:
>100_bases TCCGACCGTCGGGTTCGGGTAACTCCGAACCCTGACACTCCTCTTCTCCCTTCCCAAAATAAATGTGAGGACTCCCTATG TCCAAAAGACAATGGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNTSVILSYAFMYFVLFVAVPFVFVMFVMTCIKFFKAGPDEAEHHEMKLKPVLFDKQSFNFFKSLKTVVEGKYDVCCNVP LDTVFEMDQHDADLNHECRLDYVLIDHDSSEVKMVISDFGKEHNSPMKKLFSKFNINFIEMNQHKQWDTQSLKQALAV
Sequences:
>Translated_158_residues MNTSVILSYAFMYFVLFVAVPFVFVMFVMTCIKFFKAGPDEAEHHEMKLKPVLFDKQSFNFFKSLKTVVEGKYDVCCNVP LDTVFEMDQHDADLNHECRLDYVLIDHDSSEVKMVISDFGKEHNSPMKKLFSKFNINFIEMNQHKQWDTQSLKQALAV >Mature_158_residues MNTSVILSYAFMYFVLFVAVPFVFVMFVMTCIKFFKAGPDEAEHHEMKLKPVLFDKQSFNFFKSLKTVVEGKYDVCCNVP LDTVFEMDQHDADLNHECRLDYVLIDHDSSEVKMVISDFGKEHNSPMKKLFSKFNINFIEMNQHKQWDTQSLKQALAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18469; Mature: 18469
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSVILSYAFMYFVLFVAVPFVFVMFVMTCIKFFKAGPDEAEHHEMKLKPVLFDKQSFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCEEECCHHHH FFKSLKTVVEGKYDVCCNVPLDTVFEMDQHDADLNHECRLDYVLIDHDSSEVKMVISDFG HHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHC KEHNSPMKKLFSKFNINFIEMNQHKQWDTQSLKQALAV CCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNTSVILSYAFMYFVLFVAVPFVFVMFVMTCIKFFKAGPDEAEHHEMKLKPVLFDKQSFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCEEECCHHHH FFKSLKTVVEGKYDVCCNVPLDTVFEMDQHDADLNHECRLDYVLIDHDSSEVKMVISDFG HHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHC KEHNSPMKKLFSKFNINFIEMNQHKQWDTQSLKQALAV CCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA