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The map label for this gene is fdxI [H]

Identifier: 160877332

GI number: 160877332

Start: 5006469

End: 5007452

Strand: Direct

Name: fdxI [H]

Synonym: Sbal195_4230

Alternate gene names: 160877332

Gene position: 5006469-5007452 (Clockwise)

Preceding gene: 160877331

Following gene: 160877335

Centisome position: 93.63

GC content: 48.17

Gene sequence:

>984_bases
ATGAACAAATGGTTCAAACACATAGGCTTAGCCATAGCACTGTTATTTAGTGCCGTGTGTCTAGCCAATGGTAGTGATGA
CCAAGCGCTCCAACCTCAAGCCTCTGATGCCCAAATTTGGGCACAGCTAAAGGATGGCGCCACGGGATACACTACCTCCC
AAAGCGAGTTCCACGCTCAACCGATCAATACCTATGATCTGCGGGTGCTCGAACTACGTAGCGACTGGTTAGCACCGGCC
TTAATGGCAGCGCTATTCGGCATGATCATTATCTTTGTCTTATTTATCAAGGTGAACGGCATCTCCAAGCTACACCATGG
TTTTTCAGGCAAGTTAGTGCATCGCTGGTCTAAGTTTGACGTTTCAATCCACTGGTTAGGCGCAATCCCGTGCTTGCTGT
TGATTTTAACAGGCTTAACCTTGCTAGCGGGTCGCTTCTTCTTCCAACCTTGGCTCAGCGAAGGCATCTGGGAAGCTATC
GTCTATGGTGCTAAGCAAATCCATGACGTGATGGCGATTCCCTTCATGATAGGTTGGGCATTAATGACCACCCTATGGGC
GAAAAACCAGCTACCAAAAATGTACGACGTGAAGTGGTTCTTAGTGGTCGGTGGTTACATTAACTTTGGCCCGTTTAAAG
GTAAGCACCCAGACGCAGGTTTTGCCAACGCCGGTGAGAAAATGTGGTTCTGGGCCTTTGCCCTGTTTGGATTAGTGATT
TCGGCCTCGGGCATGTTGTTACTCTTCCCTAACCTATTCGAACCTAGCCGTACATTAAGCTTGATCGCACTTGTGCTGCA
CTCTGTCAGCGCAATCGTGATCTGTGCTTTCTCTATCGTGCACATCTTCATGGCAACCGTGATGTCAGAAGGCGGTATGG
AATGTATGGTGTCTGGCTACTGTGATGAAAACTGGGCAAGCCAACATCACAACCTGTGGTTTGACGAAATCAAAGCTAAC
GGCACCTTGAAATACAAAGACTAA

Upstream 100 bases:

>100_bases
CTAAAAACGCGGCTTGGAATTAATTCAGGTCAACAGGATCTGTCCACAGACTTAGCTTGGCGCCTGCAGGCAGGCGCCAC
TAAGCGAGAGAGGATGTATG

Downstream 100 bases:

>100_bases
CTGCCATTGACTCGTCTCAACGCATAAAAGAAACCGTCGGTTTAACTAAAAACACCTCGCAGCGTCGAGGTGTTTTTCTT
CATGCCAATATTGATACATT

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate dehydrogenase subunit gamma; FDH subunit gamma [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNKWFKHIGLAIALLFSAVCLANGSDDQALQPQASDAQIWAQLKDGATGYTTSQSEFHAQPINTYDLRVLELRSDWLAPA
LMAALFGMIIIFVLFIKVNGISKLHHGFSGKLVHRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPWLSEGIWEAI
VYGAKQIHDVMAIPFMIGWALMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLVI
SASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGYCDENWASQHHNLWFDEIKAN
GTLKYKD

Sequences:

>Translated_327_residues
MNKWFKHIGLAIALLFSAVCLANGSDDQALQPQASDAQIWAQLKDGATGYTTSQSEFHAQPINTYDLRVLELRSDWLAPA
LMAALFGMIIIFVLFIKVNGISKLHHGFSGKLVHRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPWLSEGIWEAI
VYGAKQIHDVMAIPFMIGWALMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLVI
SASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGYCDENWASQHHNLWFDEIKAN
GTLKYKD
>Mature_327_residues
MNKWFKHIGLAIALLFSAVCLANGSDDQALQPQASDAQIWAQLKDGATGYTTSQSEFHAQPINTYDLRVLELRSDWLAPA
LMAALFGMIIIFVLFIKVNGISKLHHGFSGKLVHRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPWLSEGIWEAI
VYGAKQIHDVMAIPFMIGWALMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLVI
SASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGYCDENWASQHHNLWFDEIKAN
GTLKYKD

Specific function: Allows to use formate as major electron donor during anaerobic respiration. Subunit gamma is probably the cytochrome b556(FDO) component of the formate dehydrogenase [H]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the formate dehydrogenase gamma subunit family [H]

Homologues:

Organism=Escherichia coli, GI1790325, Length=109, Percent_Identity=33.0275229357798, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787750, Length=225, Percent_Identity=24, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174
- InterPro:   IPR006471 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: 1.2.1.2

Molecular weight: Translated: 36556; Mature: 36556

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWFKHIGLAIALLFSAVCLANGSDDQALQPQASDAQIWAQLKDGATGYTTSQSEFHAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCC
PINTYDLRVLELRSDWLAPALMAALFGMIIIFVLFIKVNGISKLHHGFSGKLVHRWSKFD
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHC
VSIHWLGAIPCLLLILTGLTLLAGRFFFQPWLSEGIWEAIVYGAKQIHDVMAIPFMIGWA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLVI
HHHHHHHHCCCCCHHCCEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGY
HCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
CDENWASQHHNLWFDEIKANGTLKYKD
CCCCHHHHCCCCCHHHHCCCCEEEECC
>Mature Secondary Structure
MNKWFKHIGLAIALLFSAVCLANGSDDQALQPQASDAQIWAQLKDGATGYTTSQSEFHAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCC
PINTYDLRVLELRSDWLAPALMAALFGMIIIFVLFIKVNGISKLHHGFSGKLVHRWSKFD
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHC
VSIHWLGAIPCLLLILTGLTLLAGRFFFQPWLSEGIWEAIVYGAKQIHDVMAIPFMIGWA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLVI
HHHHHHHHCCCCCHHCCEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGY
HCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
CDENWASQHHNLWFDEIKANGTLKYKD
CCCCHHHHCCCCCHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]