Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160877114

Identifier: 160877114

GI number: 160877114

Start: 4720021

End: 4721070

Strand: Reverse

Name: 160877114

Synonym: Sbal195_4010

Alternate gene names: NA

Gene position: 4721070-4720021 (Counterclockwise)

Preceding gene: 160877115

Following gene: 160877113

Centisome position: 88.29

GC content: 53.71

Gene sequence:

>1050_bases
ATGCCGTGCCAGTTAACCCGATTATTTGGAATCGAATTGCCAATTATTCAAGCGCCTATGGCGGGTGTTCAGGGCAGTGC
CTTAACGATAGCCGTGTCGCAAGCGGGTGCGTTGGGATCTTTGCCCTGCGCCATGTTATCCCTTGAAGCCTTAGATGCCG
CGTTGATACAGGTCCGCGCCCAGACGACTAAGCCCATCAATGTAAACTTCTTTTGTCATCACGAGCCCGAACCGCAAGCG
GCGAAACAAGCTGCATGGCTCAAGCAACTCGCGCCTTATTTTGCTGAGCTGGGTATCCATTCTGATACCCACGCTGCGGG
AGCACAACGCGCGCCCTACACGAGTGCTCAGGCTGAAGTGTTAGCAAAATTCAAGCCTGAGGTTGTGAGTTTTCACTTTG
GTTTACCCAATGAAGACTTGTTGCTGGAGATAAAATCTTGGGGATCTAAGATCATCTCGACGGCGACCACAGTGGAAGAG
GCGCTCTGGTTAGAAGCGCGTGGTGTAGATGCTATTATTGCGCAGGGCTTAGAAGCTGGCGGCCATAGAGGACATTTCTT
ATCCGATGATTTGACTGAGCAGCTCGGCACTTTTAGTTTATTGCCGCAAATCATTGCTGCCGTTGATGTGCCCGTTATCG
CAGCGGGTGGCATAGTCGATGCAAAAACCGTGCGTGCCGCCATGGCGATGGGCGCTTCGGCGGTGCAAGTTGGGACGGCC
TATTTACTTTGCCCTGAATGCACCACCAGTGAGATCCATCGCGCCGCACTGCAAAGCGAGGCGGTGCAGCATACGGCTCT
GACTAACTTATTTTCTGGTCGCCCCGCACGCGGCATAGTGAATCGTTTTATGGCTGAACTTGGACCTATCAATAACGCAG
TACCGGATTTTCCGCTCGCCTCCAGTGCCGTCGCAGTATTGCGAAGCGCCGCCGAGCAACAAGGGTTCGGTGATTTTAGC
CCGCTCTGGTGCGGCCAAAATGCAGCCGGCTGTCAGGCGATTCCCGCCGCAGAGCTCACCAAGCAATTGGCGTTAGGCTT
GATAGTTTAA

Upstream 100 bases:

>100_bases
CGGGATCCCGTGGGCAATTTGTGGTGGATCTCCCAACGTTTAGCCGCAGGACCATATCAGGATTGAGCGTTAAGTGATAA
CCAGTCAAAGGAGATGATGT

Downstream 100 bases:

>100_bases
GATGTTGTATTAATAGACCATTAATACTCATTGATATGCTCACCAAGGCTTACATTTTACATGGCTAAATTAGCGGCTTG
TTAGTTTATACTCACTGTTT

Product: 2-nitropropane dioxygenase NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRAQTTKPINVNFFCHHEPEPQA
AKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEE
ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLASSAVAVLRSAAEQQGFGDFS
PLWCGQNAAGCQAIPAAELTKQLALGLIV

Sequences:

>Translated_349_residues
MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRAQTTKPINVNFFCHHEPEPQA
AKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEE
ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLASSAVAVLRSAAEQQGFGDFS
PLWCGQNAAGCQAIPAAELTKQLALGLIV
>Mature_348_residues
PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRAQTTKPINVNFFCHHEPEPQAA
KQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEEA
LWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTAY
LLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLASSAVAVLRSAAEQQGFGDFSP
LWCGQNAAGCQAIPAAELTKQLALGLIV

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=323, Percent_Identity=31.5789473684211, Blast_Score=143, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 36601; Mature: 36470

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRA
CCCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QTTKPINVNFFCHHEPEPQAAKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEEALWLEARGVDAIIAQGLEAG
HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE
YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
SSAVAVLRSAAEQQGFGDFSPLWCGQNAAGCQAIPAAELTKQLALGLIV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRA
CCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QTTKPINVNFFCHHEPEPQAAKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEEALWLEARGVDAIIAQGLEAG
HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE
YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
SSAVAVLRSAAEQQGFGDFSPLWCGQNAAGCQAIPAAELTKQLALGLIV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA