| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877088
Identifier: 160877088
GI number: 160877088
Start: 4688485
End: 4689294
Strand: Reverse
Name: 160877088
Synonym: Sbal195_3984
Alternate gene names: NA
Gene position: 4689294-4688485 (Counterclockwise)
Preceding gene: 160877092
Following gene: 160877087
Centisome position: 87.69
GC content: 52.59
Gene sequence:
>810_bases ATGAATATCCCAGTAAAGTTTACTCAAGGAAAGTGTGTTCAAAGTCAATCACATGGCGTGCTTAAGCGGCCGCTAAAGTG TTTGGTTTTGTCGCTGGCTGTGGGGATATCGCTCTTGGGCGCGCTCAGTGTGTCGACTGCGGCGGTTGCCGGACATCGGG ACCATTCGGAGCAAGGCGAGCGCCAAGGTCATCGTGATAGCCACAGCCGTGGAGAAAGTCATTACAACAATCGTCATGAC AACCATTACGATAACCGCCATGTGCGCAACGATAATCGCCACTATCGTCCCTACTACCGACCTTATTACCCTTGGGGTTT AGGACTGGGTTTAGGGCTCGCTACGGGTTGGGGTTCTGGCTGGAATGTCGGTTATGGTGTGAACAGCCAGTGGAACAATG ATTGGGGCTGGAATACTTCGCGTGACGCTTACGCTCGAAATTACTGGAACTCGCCCTATTCGGGCATAGGCCTGTCGATT CCTATGCGCTACGACGATGAACCTGTGGCGATTTCTACGCCTGTACGGGTCACAACCAGTATGCAATATTCTGCGAGTGA AGGCCGTATGGTATCGAGTATGCCTGTAAATATGGCCGGACAATCGACTGGGCAACTGGTGTCGCAAGCTAGCAATGCCG CAAGCAAGACGGCTGCGACTCCCCGTCCACGGGCGGCGCACAGTGTGTCTAGCTTGCCGAGCAATGCCAGAATTGTGCAG CAGGATGGCCGTACACTTTACGAGTGGCAAGGCACGCTTTATGCTTTTGACTGGAATAGTCAAACCTATCAAGAACAGTT AGCACGATAG
Upstream 100 bases:
>100_bases TAGGGTTAACCAATTCAGTGATCTTCAAGCTTAGGAAGCGTAAAATGGACATCAGTAAGTTACGATTGATCTCGCTTACG CCCTTTATTTCGAGGTTTAT
Downstream 100 bases:
>100_bases ATTCAAATCACTTAATTACTGAAAATCGGAGCCCCATAGTGGGCTCCAATTTATTTTTAGCACTTAACTTTGTAATTAAT ATCATTTTATAGAATAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MNIPVKFTQGKCVQSQSHGVLKRPLKCLVLSLAVGISLLGALSVSTAAVAGHRDHSEQGERQGHRDSHSRGESHYNNRHD NHYDNRHVRNDNRHYRPYYRPYYPWGLGLGLGLATGWGSGWNVGYGVNSQWNNDWGWNTSRDAYARNYWNSPYSGIGLSI PMRYDDEPVAISTPVRVTTSMQYSASEGRMVSSMPVNMAGQSTGQLVSQASNAASKTAATPRPRAAHSVSSLPSNARIVQ QDGRTLYEWQGTLYAFDWNSQTYQEQLAR
Sequences:
>Translated_269_residues MNIPVKFTQGKCVQSQSHGVLKRPLKCLVLSLAVGISLLGALSVSTAAVAGHRDHSEQGERQGHRDSHSRGESHYNNRHD NHYDNRHVRNDNRHYRPYYRPYYPWGLGLGLGLATGWGSGWNVGYGVNSQWNNDWGWNTSRDAYARNYWNSPYSGIGLSI PMRYDDEPVAISTPVRVTTSMQYSASEGRMVSSMPVNMAGQSTGQLVSQASNAASKTAATPRPRAAHSVSSLPSNARIVQ QDGRTLYEWQGTLYAFDWNSQTYQEQLAR >Mature_269_residues MNIPVKFTQGKCVQSQSHGVLKRPLKCLVLSLAVGISLLGALSVSTAAVAGHRDHSEQGERQGHRDSHSRGESHYNNRHD NHYDNRHVRNDNRHYRPYYRPYYPWGLGLGLGLATGWGSGWNVGYGVNSQWNNDWGWNTSRDAYARNYWNSPYSGIGLSI PMRYDDEPVAISTPVRVTTSMQYSASEGRMVSSMPVNMAGQSTGQLVSQASNAASKTAATPRPRAAHSVSSLPSNARIVQ QDGRTLYEWQGTLYAFDWNSQTYQEQLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29991; Mature: 29991
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPVKFTQGKCVQSQSHGVLKRPLKCLVLSLAVGISLLGALSVSTAAVAGHRDHSEQGE CCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RQGHRDSHSRGESHYNNRHDNHYDNRHVRNDNRHYRPYYRPYYPWGLGLGLGLATGWGSG HCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC WNVGYGVNSQWNNDWGWNTSRDAYARNYWNSPYSGIGLSIPMRYDDEPVAISTPVRVTTS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCEEEECCEEEEEE MQYSASEGRMVSSMPVNMAGQSTGQLVSQASNAASKTAATPRPRAAHSVSSLPSNARIVQ EEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEE QDGRTLYEWQGTLYAFDWNSQTYQEQLAR CCCCEEEEECCEEEEEECCCHHHHHHHCC >Mature Secondary Structure MNIPVKFTQGKCVQSQSHGVLKRPLKCLVLSLAVGISLLGALSVSTAAVAGHRDHSEQGE CCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RQGHRDSHSRGESHYNNRHDNHYDNRHVRNDNRHYRPYYRPYYPWGLGLGLGLATGWGSG HCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC WNVGYGVNSQWNNDWGWNTSRDAYARNYWNSPYSGIGLSIPMRYDDEPVAISTPVRVTTS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCEEEECCEEEEEE MQYSASEGRMVSSMPVNMAGQSTGQLVSQASNAASKTAATPRPRAAHSVSSLPSNARIVQ EEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEE QDGRTLYEWQGTLYAFDWNSQTYQEQLAR CCCCEEEEECCEEEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA