| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mutL [H]
Identifier: 160876999
GI number: 160876999
Start: 4588803
End: 4590719
Strand: Reverse
Name: mutL [H]
Synonym: Sbal195_3895
Alternate gene names: 160876999
Gene position: 4590719-4588803 (Counterclockwise)
Preceding gene: 160877000
Following gene: 160876998
Centisome position: 85.85
GC content: 48.2
Gene sequence:
>1917_bases ATGATGGGCATTCAGATCCTGCCACCGCAATTAGCCAACCAAATTGCGGCGGGGGAAGTGGTTGAGAGACCCGCTTCCGT AGTCAAAGAATTGGTCGAGAATAGTCTCGACGCAGGAGCGAGCCGAGTCGATATTGAAATCGACAAAGGCGGTAGCAAGC TGATTAAAATTCGCGATAACGGATCTGGTATACCCAAAGATGAACTCGCGCTGGCCTTATCGCGCCATGCGACCTCAAAG TTACACACCTTAGACGATCTCGAAGCGATCCTCAGTTTTGGTTTTCGCGGTGAAGCGTTAGCGAGTATCAGCTCAGTCTC ACGCTTAACCTTAACCTCGCGCACTGCTGATCAAACCGAAGCATGGCAAGCCCATGCTGAAGGTGCCGACATGGCGGTTA AAGTCATGCCCGCCGCGCATCCTGTTGGTTCTACGATTGAAGTGGTGGATTTATTCTTCAATACGCCAGCTCGCAGACGC TTTTTAAAGAGCGATAAAACCGAATTTACCCATATCGATGAATGGTTAAAGCGCATTGCATTAGTGCGCGGCGATATCCA TTTAACGCTGACCCATAACGGTAAGACGGTACGTAATTATCGTCCCGCCATGAATGAAGCCCAGTATTTACAGCGTTTGA CGCAAGTAAGTGGTCGCCCATTTGCTGAGCAAGCGCTTAAGATTGAATGCCAGCATGATGATTTACGCCTAAGTGGCTAT TTGCAGTCACCTTGGTCGCCCGTTATCAGCGATACCCATTACTTTTATGTCAACGGACGCTTAATCCGTGACCGCTTAGT CAATCACGCGGTGCGCCAGGCTTTTGCCCAAAAAGCGGAACTGGAGCAACCCGGCTATGTGTTGATGTTGGATATCGATC CCCATCAAGTGGATGTTAACGTGCATCCTGCTAAGCATGAGGTGCGATTCCATCAGAGTCGCTATGTGCATGATTATATT CTGCAAGCATTGCAATCGGCTCTGGAAGAAGCAGGGGAACTCAACTTCGTTCACTCTAGTTCCTTGGATGAAGTTGAAGA TGTGTTTGTGGATGCCCCGACAAGCGCCACTGAAATCTCAGCCCCTTTTGTACTTGGTGCTGATTCAGCTCAAGTTAATG TGCCAGCTGATACACTTGAGTCTGCTCAACCGTTAGTTGCCTCTGCCGTTCAAGTAAAATCTGCCGGCGCAGGACGAGAA GGCGCCAGTTTTGGCACTCAAACGAATGCCTTTGGCAGCATGGCTACGCCAAGGGACAATAGTCGCGGCAATTATTCTGC TGGTGAATCTCGTCAACGTACTGAATTACCGTCAAAAGCGGCAATTGCAAGTTATGGTGCTTTACTGCAAACACCTTCTT ACAGTGTAAAAGATCAAGATTATCAGCCATCTCTGCCTATGCCTGCGATTTTAGATGGCCAATATTGGGTAATGGCGACG GCGGATAAACTGAGTCTATTGCCAATAAAATCAGTAGCATTGGCGACGCGCTGCCAAGAGATTGAGGCTAAGCTAGCGAC CGGATTAATTGGGCAGCCTTTATTGATGCCAGTGTCTGTCGCGGCCGATGCAGATTGGCAGGCTGTGCTCGATGAACATG ACACGCTGATCCGCCAGTTAGGTTTAGAACTAACAATTCGTTACCAGCAGTTGATTATTAAAAAAGTGCCCCCATATATC AGAGAGAGCCAGTTAGCAAAAGTGATCCCTGAGTGGTTACAATCGCTGCGTTTTGAAACACCTGCGCCAAGCGCATTGGC ATTTTGGTTGGCAAAACACAGTTTAACGGGATTCGTTTCGGCACCAGAAATCTGGGCAGCATTTTCGCAGTTAGCTGAAG AGAAAAAACAGCTTATTGCCAACAAAGCAATATTACTACCTTGGCAATCGTGGCTAGAAGAGCAAGCAAGTGAATAA
Upstream 100 bases:
>100_bases CGTGTGCCTATGTCTAGCATCAAACAAGCGAATGGGATGAAGTCCGATGTAGTGCAGTTAGGGCAAACATTAGTCATACC CCAGAGTTAAATAGGAAAGC
Downstream 100 bases:
>100_bases AGAATTACAGCCTAAAGTGATATTTTTGATGGGGCCAACGGCCTCAGGCAAAACTGCTTTAGCATTAGAATTGGCCGAAA AGCATAACTGTGAAATCATT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSK LHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEAWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRR FLKSDKTEFTHIDEWLKRIALVRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGY LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEISAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGRE GASFGTQTNAFGSMATPRDNSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQLIIKKVPPYI RESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVSAPEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE
Sequences:
>Translated_638_residues MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSK LHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEAWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRR FLKSDKTEFTHIDEWLKRIALVRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGY LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEISAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGRE GASFGTQTNAFGSMATPRDNSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQLIIKKVPPYI RESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVSAPEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE >Mature_638_residues MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSK LHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEAWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRR FLKSDKTEFTHIDEWLKRIALVRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGY LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEISAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGRE GASFGTQTNAFGSMATPRDNSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQLIIKKVPPYI RESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVSAPEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=328, Percent_Identity=35.0609756097561, Blast_Score=210, Evalue=4e-54, Organism=Homo sapiens, GI4505911, Length=317, Percent_Identity=27.7602523659306, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI189458898, Length=317, Percent_Identity=27.7602523659306, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI189458896, Length=309, Percent_Identity=27.5080906148867, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI4505913, Length=340, Percent_Identity=26.7647058823529, Blast_Score=127, Evalue=4e-29, Organism=Homo sapiens, GI310128478, Length=340, Percent_Identity=26.7647058823529, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI263191589, Length=234, Percent_Identity=30.3418803418803, Blast_Score=113, Evalue=7e-25, Organism=Homo sapiens, GI91992162, Length=264, Percent_Identity=25.7575757575758, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI91992160, Length=264, Percent_Identity=25.7575757575758, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI310128480, Length=302, Percent_Identity=23.841059602649, Blast_Score=89, Evalue=9e-18, Organism=Escherichia coli, GI1790612, Length=615, Percent_Identity=47.6422764227642, Blast_Score=487, Evalue=1e-139, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=34.472049689441, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17562796, Length=483, Percent_Identity=25.0517598343685, Blast_Score=126, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=341, Percent_Identity=35.1906158357771, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=348, Percent_Identity=27.8735632183908, Blast_Score=101, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6325093, Length=357, Percent_Identity=26.6106442577031, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323063, Length=361, Percent_Identity=25.207756232687, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI17136968, Length=334, Percent_Identity=32.3353293413174, Blast_Score=179, Evalue=7e-45, Organism=Drosophila melanogaster, GI17136970, Length=356, Percent_Identity=26.4044943820225, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 70221; Mature: 70221
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDN CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECC GSGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCHHH AWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIA HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH LVRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGY HHCCCEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCCCEEEEEE LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVN ECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE VHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEIS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCC APFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGASFGTQTNAFGSMATPRDN CCEEEECCCCEEECCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEE ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQL CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHC GLELTIRYQQLIIKKVPPYIRESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVS CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC APEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE CHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCC >Mature Secondary Structure MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDN CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECC GSGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCHHH AWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIA HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH LVRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGY HHCCCEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCCCEEEEEE LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVN ECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE VHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEIS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCC APFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGASFGTQTNAFGSMATPRDN CCEEEECCCCEEECCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEE ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQL CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHC GLELTIRYQQLIIKKVPPYIRESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVS CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC APEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE CHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA