Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160876018

Identifier: 160876018

GI number: 160876018

Start: 3456534

End: 3457355

Strand: Reverse

Name: 160876018

Synonym: Sbal195_2908

Alternate gene names: NA

Gene position: 3457355-3456534 (Counterclockwise)

Preceding gene: 160876019

Following gene: 160876017

Centisome position: 64.66

GC content: 52.92

Gene sequence:

>822_bases
ATGACCCTAAAAAAAGGCAGCAACGGCTCTCAAGTGCGTGATTTACAACAACGGCTCAATGCCGCTGGCGCGTCATTAAC
GGTAGATGGTTGGTTTGGTGATGCAACCCAAAAGGCCATCGAGCAATTCCAAGATAAGCAAGACTTACCGCGCACCGGCT
ACGCAGGGGTAAGAACGCTGGCATTACTCGCCGGCGAAAGCCGCAGCAAGTTTATTCAGCACTCACAATTAGCTGACGCT
GCAATGGTGCTGAGTGTCTCGTTTGCCGCCATGGCCAGTGTGGCAGAAGTGGAATCCAACGGCTTTGGCTTTTTCGCCTG
TGGTAGGCCAACGATTTTATTTGAGCGTCATGTGTTTTATCGCGAGCTGCTGGAACAAGGCGCCGCAGCGGCAGAGCTTG
CGGCTAAGTACCCGAATATTTGCAACTCAGCCCGTGGCGGTTACACCGGCGGCAGTGGTGAATATCAACGGTTTGCTATT
GCGTACCAGCTTAATCCAGAGGCCGCAATTTGTGCCTGCAGCTGGGGCATGTTTCAGATCATGGGCTTTCATTGGCAAGC
CTTGGGCTATCCATCGCCGCAGGCCTTCAAGCAAGCCATGGATACATCAGAGGGGGAACAGCTCCAGGCTTTAGTCAAAT
TTATCGAGGCGGATCCTGTGTTACATAAGGCACTCAAAGCGCGTAAGTGGGCAGAGTTTGCCAAGCGCTACAACGGCCCC
GCCTATAAAGAGAATGACTACGACATTAAATTAGCGCGCACGTATCAGCAGTTTACTGCCGCGAGTCAGCAGCAGGGCGC
CGATAATGTTGTCGCTGCTTAG

Upstream 100 bases:

>100_bases
ATGTTGCGCATCTTCTGCAACCAAACTCGAAAAAAGTTGGTAGCAGGCTAGTGCGCATTCCCCGTGCACAAACATTCAAA
ACCAAACATAGGTAATTGAC

Downstream 100 bases:

>100_bases
CCGGTTTATTCAACCATTTGCAGGCTATTTAATTGTCGCCGCCATCGGGATTACGCTCACCATGGCGGGTGTGATTTATC
TGCAGCAAGAGCGACTAAAT

Product: peptidoglycan-binding domain-containing protein

Products: NA

Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; Lytic Transglycosylase Catalytic; Phage-Like Protein; DNA-Directed RNA Polymerase Beta Chain; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein; LysM Domain Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTLALLAGESRSKFIQHSQLADA
AMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFYRELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAI
AYQLNPEAAICACSWGMFQIMGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP
AYKENDYDIKLARTYQQFTAASQQQGADNVVAA

Sequences:

>Translated_273_residues
MTLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTLALLAGESRSKFIQHSQLADA
AMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFYRELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAI
AYQLNPEAAICACSWGMFQIMGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP
AYKENDYDIKLARTYQQFTAASQQQGADNVVAA
>Mature_272_residues
TLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTLALLAGESRSKFIQHSQLADAA
MVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFYRELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAIA
YQLNPEAAICACSWGMFQIMGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGPA
YKENDYDIKLARTYQQFTAASQQQGADNVVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29868; Mature: 29737

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTL
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
ALLAGESRSKFIQHSQLADAAMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHH
RELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAIAYQLNPEAAICACSWGMFQI
HHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHH
MGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP
HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
AYKENDYDIKLARTYQQFTAASQQQGADNVVAA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTL
CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
ALLAGESRSKFIQHSQLADAAMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHH
RELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAIAYQLNPEAAICACSWGMFQI
HHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHH
MGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP
HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
AYKENDYDIKLARTYQQFTAASQQQGADNVVAA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA