| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is melA [H]
Identifier: 160875841
GI number: 160875841
Start: 3235786
End: 3236826
Strand: Direct
Name: melA [H]
Synonym: Sbal195_2729
Alternate gene names: 160875841
Gene position: 3235786-3236826 (Clockwise)
Preceding gene: 160875840
Following gene: 160875843
Centisome position: 60.51
GC content: 44.0
Gene sequence:
>1041_bases ATGGCAAGCGAACTAAATCCACTGGGCTTATTAGGTATCGAATTCACTGAATTCGCCAGCCCTGATACTGATTTTATGCA CAAAGTCTTTATAGACTTTGGTTTTTCACTGCTGAAAAAAGCCAAGAACAAAAACATTCTGTACTACAAACAGAATGACA TTAATTTTCTGCTCAACACTGAGCGCGAAGGTTTCTCTGCTAAGTTTGCTAAATCCCACGGCCCAGCCATTTGTTCTATG GGCTGGCGGGTAGAAGATGCCGGCTTTGCCTATCGCGTTGCCGTTGAACGTGGTGCAAAACCCGCCGATGATGCCAATAA AGATCTGCCTTATCCTGCGATTTACGGCATTGGCGACAGCTTGATTTATTTCATCGACACCTTTGGCGCAGATAACAATA TCTATGCCGCTGATTTTGAAGACTTAGACGAGCAAGTGATCACCCAAGAGAAAGGCTTTATCGAAGTCGATCACTTAACC AACAACGTTTACAAAGGCACAATGGAACATTGGGCTAACTTCTATAAAAACATTTTTGGTTTTACTGAAGTGCGCTACTT TGACATCAGCGGCGTACAAACCGCGCTAGTGTCCTACGCCCTGCGTTCGCCCGATGGCAGCTTCTGTATTCCGATTAACG AAGGTAAAGGCAGCGATAAGAACCAAATCGATGAATACCTGAAGGAATACAATGGCCCAGGTGTGCAGCATTTAGCCTTT AGAAGTCGCGATATCGTAAAATCTCTGGATGCGATGGAAGGCAGTTCAATCCAATGCTTAGACATTATCCCTGAATACTA CGACACCATATTTGAGAAGTTACCGCAGGTGACTGAGAATCGTGAGCGCATCAAACATCACCAAATTTTGGTGGATGGCG ATGAATCCGGTTATTTACTGCAAATTTTCACTAAAAACCTGTTCGGACCGATTTTTATCGAAATCATCCAACGCAAGAAT AACTTAGGTTTTGGTGAAGGCAACTTTACTGCCCTGTTTGAATCGATTGAGCGGGATCAAATGCGTCGCGGCGTACTGTA A
Upstream 100 bases:
>100_bases TAGCCCTAAGCCACCAGCGCACCGAAAAGGTTGCGTATCCCAACGTAATAAAAGGGATAAAGAGTGTCGGCGGTTGAACT AAAATAATGAGGAAAACATC
Downstream 100 bases:
>100_bases GTTTTCATCCTGCTAATAAAAAACGGTACGCACTGCGTACCGTTTTTGTTTCTACGACTATCTAAATCGTCATCTAAATC AGCATCAGCATTGACGCCAA
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: homogentisate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MASELNPLGLLGIEFTEFASPDTDFMHKVFIDFGFSLLKKAKNKNILYYKQNDINFLLNTEREGFSAKFAKSHGPAICSM GWRVEDAGFAYRVAVERGAKPADDANKDLPYPAIYGIGDSLIYFIDTFGADNNIYAADFEDLDEQVITQEKGFIEVDHLT NNVYKGTMEHWANFYKNIFGFTEVRYFDISGVQTALVSYALRSPDGSFCIPINEGKGSDKNQIDEYLKEYNGPGVQHLAF RSRDIVKSLDAMEGSSIQCLDIIPEYYDTIFEKLPQVTENRERIKHHQILVDGDESGYLLQIFTKNLFGPIFIEIIQRKN NLGFGEGNFTALFESIERDQMRRGVL
Sequences:
>Translated_346_residues MASELNPLGLLGIEFTEFASPDTDFMHKVFIDFGFSLLKKAKNKNILYYKQNDINFLLNTEREGFSAKFAKSHGPAICSM GWRVEDAGFAYRVAVERGAKPADDANKDLPYPAIYGIGDSLIYFIDTFGADNNIYAADFEDLDEQVITQEKGFIEVDHLT NNVYKGTMEHWANFYKNIFGFTEVRYFDISGVQTALVSYALRSPDGSFCIPINEGKGSDKNQIDEYLKEYNGPGVQHLAF RSRDIVKSLDAMEGSSIQCLDIIPEYYDTIFEKLPQVTENRERIKHHQILVDGDESGYLLQIFTKNLFGPIFIEIIQRKN NLGFGEGNFTALFESIERDQMRRGVL >Mature_345_residues ASELNPLGLLGIEFTEFASPDTDFMHKVFIDFGFSLLKKAKNKNILYYKQNDINFLLNTEREGFSAKFAKSHGPAICSMG WRVEDAGFAYRVAVERGAKPADDANKDLPYPAIYGIGDSLIYFIDTFGADNNIYAADFEDLDEQVITQEKGFIEVDHLTN NVYKGTMEHWANFYKNIFGFTEVRYFDISGVQTALVSYALRSPDGSFCIPINEGKGSDKNQIDEYLKEYNGPGVQHLAFR SRDIVKSLDAMEGSSIQCLDIIPEYYDTIFEKLPQVTENRERIKHHQILVDGDESGYLLQIFTKNLFGPIFIEIIQRKNN LGFGEGNFTALFESIERDQMRRGVL
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI285002264, Length=320, Percent_Identity=30.3125, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI4504477, Length=320, Percent_Identity=30.3125, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI14249394, Length=344, Percent_Identity=24.1279069767442, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17555220, Length=203, Percent_Identity=39.9014778325123, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17550752, Length=206, Percent_Identity=37.8640776699029, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI21356105, Length=299, Percent_Identity=33.7792642140468, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24667510, Length=299, Percent_Identity=33.7792642140468, Blast_Score=139, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 1.13.11.27
Molecular weight: Translated: 39339; Mature: 39208
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASELNPLGLLGIEFTEFASPDTDFMHKVFIDFGFSLLKKAKNKNILYYKQNDINFLLNT CCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEC EREGFSAKFAKSHGPAICSMGWRVEDAGFAYRVAVERGAKPADDANKDLPYPAIYGIGDS CCCCCCHHHHHCCCCEEEECCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCC LIYFIDTFGADNNIYAADFEDLDEQVITQEKGFIEVDHLTNNVYKGTMEHWANFYKNIFG EEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCEEEECHHCHHHHHHHHHHHHHHHHHHC FTEVRYFDISGVQTALVSYALRSPDGSFCIPINEGKGSDKNQIDEYLKEYNGPGVQHLAF HHEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHH RSRDIVKSLDAMEGSSIQCLDIIPEYYDTIFEKLPQVTENRERIKHHQILVDGDESGYLL HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEE QIFTKNLFGPIFIEIIQRKNNLGFGEGNFTALFESIERDQMRRGVL EEEHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASELNPLGLLGIEFTEFASPDTDFMHKVFIDFGFSLLKKAKNKNILYYKQNDINFLLNT CCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEC EREGFSAKFAKSHGPAICSMGWRVEDAGFAYRVAVERGAKPADDANKDLPYPAIYGIGDS CCCCCCHHHHHCCCCEEEECCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCC LIYFIDTFGADNNIYAADFEDLDEQVITQEKGFIEVDHLTNNVYKGTMEHWANFYKNIFG EEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCEEEECHHCHHHHHHHHHHHHHHHHHHC FTEVRYFDISGVQTALVSYALRSPDGSFCIPINEGKGSDKNQIDEYLKEYNGPGVQHLAF HHEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHH RSRDIVKSLDAMEGSSIQCLDIIPEYYDTIFEKLPQVTENRERIKHHQILVDGDESGYLL HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEE QIFTKNLFGPIFIEIIQRKNNLGFGEGNFTALFESIERDQMRRGVL EEEHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxyphenylpyruvate; O2
Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1756973 [H]