| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hemH [H]
Identifier: 160875772
GI number: 160875772
Start: 3154154
End: 3155173
Strand: Reverse
Name: hemH [H]
Synonym: Sbal195_2660
Alternate gene names: 160875772
Gene position: 3155173-3154154 (Counterclockwise)
Preceding gene: 160875773
Following gene: 160875771
Centisome position: 59.01
GC content: 50.1
Gene sequence:
>1020_bases ATGAGCCTAACGTTGAATCCTTGCCCTGCTTTTGGTGTGTTATTGGTTAACCTCGGCACGCCTGATGAACCTAGCCCTAA AGCCGTAAAACGATTTCTAAGGCAGTTTTTAAGTGATCCCCGTGTCGTCGATTTATCGCCGTGGATTTGGCAACCGCTGC TGAACGGCATTATCCTCAACACCCGTCCGGCGAAAGTCGCCAAACTCTACCAAAGCGTGTGGACGCCGGAAGGCTCGCCC TTGATGGTGATAAGTGCACGCCAAGCACAAAAGCTGGCGGTGGACTTAAGCGCCACGTTTAACCAGACCATACCGGTTGA ACTGGGCATGAGTTACGGCAATCCCTCCATCGATGCGGGATTTGAACGCTTGAAAGACCAAGGGGCAGAGCGCATTATTG TGCTGCCTTTGTATCCCCAATATTCCTGCTCGACGGTGGCAAGTGTGTTCGATGCCGTTGCCAGTTATCTTAAAACCGTG CGTGACATACCTCAGGTTCGCTTTAATAAAGACTATTTTGATCATGATGCTTATATAGCGGCGCTGGCGCATTCAGTGAC ACGTCACTGGAAAACCCATGGGCAGGCCGATAAGTTGCTCTTGTCATTTCACGGTATTCCGCTGCGTTATGTGAAAGAGG GCGATCCATACCGCGAGCAGTGTTTTGTCACGGCTAAACTGTTAGCGCAAAAACTTGAGCTTAGCGAGTCGCAATGGCAG GTGTGCTTCCAATCGCGCTTTGGCCGCGAAGAGTGGCTCACGCCCTACGCCGATCAATTATTGGCCGAGTTACCTGCACA AGGAATCAAAAGTGTCGATGTGATTTGCCCAGCGTTTGCTACTGACTGCCTCGAAACCTTAGAAGAAATCTCCATCGGCG CTAAGGAAACCTTTTTAGATGCAGGTGGCAGCGACTATCGGTTTATCCCTTGTTTGAACGACGATGAGTTACACATTGAA TTATTACGGCAATTAATCCAAGAACAAGCGGTATCTTGGGCCCATACCCAAGCCACCTGA
Upstream 100 bases:
>100_bases TAATTTACGAGAACGAGTTCTCATATTAGAAAAAAGCCTGCCGATGCAGGCTTTTTTTATGGGCATCTGAATGTTAGCCT CCAAGTGAACTTCATTAACC
Downstream 100 bases:
>100_bases AGAGTCGAGTTTCAGAGCGCCTAGGGTGATTCAATTCAAGGCGCATCAATGACAGAATGTCGGCCACCTTTTGAATTGAT GCAACACGGAAGTGAAGTGC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase 1; Protoheme ferro-lyase 1 [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLTLNPCPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILNTRPAKVAKLYQSVWTPEGSP LMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAGFERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTV RDIPQVRFNKDYFDHDAYIAALAHSVTRHWKTHGQADKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ VCFQSRFGREEWLTPYADQLLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLDAGGSDYRFIPCLNDDELHIE LLRQLIQEQAVSWAHTQAT
Sequences:
>Translated_339_residues MSLTLNPCPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILNTRPAKVAKLYQSVWTPEGSP LMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAGFERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTV RDIPQVRFNKDYFDHDAYIAALAHSVTRHWKTHGQADKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ VCFQSRFGREEWLTPYADQLLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLDAGGSDYRFIPCLNDDELHIE LLRQLIQEQAVSWAHTQAT >Mature_338_residues SLTLNPCPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILNTRPAKVAKLYQSVWTPEGSPL MVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAGFERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTVR DIPQVRFNKDYFDHDAYIAALAHSVTRHWKTHGQADKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQV CFQSRFGREEWLTPYADQLLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLDAGGSDYRFIPCLNDDELHIEL LRQLIQEQAVSWAHTQAT
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=337, Percent_Identity=25.2225519287834, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI60499025, Length=337, Percent_Identity=25.2225519287834, Blast_Score=107, Evalue=1e-23, Organism=Escherichia coli, GI1786681, Length=315, Percent_Identity=51.1111111111111, Blast_Score=318, Evalue=3e-88, Organism=Saccharomyces cerevisiae, GI6324750, Length=328, Percent_Identity=25, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17864156, Length=339, Percent_Identity=23.598820058997, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24651774, Length=264, Percent_Identity=23.1060606060606, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 38040; Mature: 37909
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLNPCPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILN CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCEEEC TRPAKVAKLYQSVWTPEGSPLMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAG CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHHHCCCCCCCEEECCCCCCCCHHHH FERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTVRDIPQVRFNKDYFDHDAYIA HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH ALAHSVTRHWKTHGQADKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHH VCFQSRFGREEWLTPYADQLLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLD HHHHHHCCHHHCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC AGGSDYRFIPCLNDDELHIELLRQLIQEQAVSWAHTQAT CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTLNPCPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILN CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCEEEC TRPAKVAKLYQSVWTPEGSPLMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAG CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHHHCCCCCCCEEECCCCCCCCHHHH FERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTVRDIPQVRFNKDYFDHDAYIA HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH ALAHSVTRHWKTHGQADKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHH VCFQSRFGREEWLTPYADQLLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLD HHHHHHCCHHHCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC AGGSDYRFIPCLNDDELHIELLRQLIQEQAVSWAHTQAT CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]