| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gsk [H]
Identifier: 160875771
GI number: 160875771
Start: 3152372
End: 3153676
Strand: Reverse
Name: gsk [H]
Synonym: Sbal195_2659
Alternate gene names: 160875771
Gene position: 3153676-3152372 (Counterclockwise)
Preceding gene: 160875772
Following gene: 160875770
Centisome position: 58.98
GC content: 46.9
Gene sequence:
>1305_bases ATGAAGTTTCCCGGTCAGCGTAAATCAAAACATTATTTTCCGGTTAAAACCCGAGATCCGCTGCTTGAACAGCTGACTCA ACAGCCTCAGCCGTTTGCGACCTATATCAGCGGTATTGATCAAACTTTAGTGGATATCGAAGCGAAAGTGGAGGACGAAT TGCTGAGCCGTTATGGCTTACCAAAAGGTAATTCGACCCTGATCAATGATGAACAGGCCCACAGACTCTACACTGAGTTA AAAATTCATGGCTTGATTAGCGATGAATTTGCAGGTGGCACGATTGGCAACACAGTGCACAACTATTCTATTCTGGCCGA TGACCGTTCAGTGTTATTCGGGGTGATGAGTCAGAATATCGAAGTGGGCAGTTACGCTTATCGCTATTTATGTAATACCT CTTCTAAAGTCGACCTTAACTTTCTACAGCCTGTAGATGGCCCTATCGGTCGCTGTTTTACCTTGATTTCTGAGTGTGGC GAGCGGACATTTGCGATTAGCAAAGGCTCGATGGATAAACTCACGCCTGAATATATTGATAAAGATGTAATACAGGGCAG CTCTGCCTTAGTGCTGACCGCATATTTAATGCGCGCTAGCGATGGCGACCGTATTACCGATGCGGCCATGTGCGCCATCG AATACGCAAAAGCCGCCGAGGTGCCGGTAGTATTGACCTTAGGCACGCGTTTTTTGATTGAAGAAGATCCGCAATGGTGG CAAAACTTCATCAAAGAACATGTCACCATTTTGGCGATGAATGAAGATGAAGGTGAAGCCTTAACCGGTTCACGGGATCC TCTGCTCGCCAGTGAAAAAGCCTTGGAATGGTGTGACATGGTATTAACCACAGCGGGTCCAATCGGGCTTTATACTGCGG GTTATACTGAAGATTCTGAAAAGCGCGAAACCGTTCATACCTTGTTGCCGGGCGCGATCCCAGAATTTAACCGTTATGAG TTCTCCCGTCCAAAGCTTAAGAATGACTGTGAAACACCAATCAAAGTGTTTGCCCACATTTCACCTTATATGGGCGGTCC AGAAAAAATTGGGAATACTAATGGGGCAGGTGATGGCGCGTTATCGGCGTTATTGCACGATCTGGCGGCTAATACTTTTC ACAAGACTAACGTGCCAGGTTCGAGCAAACATAAGCGCGATGGCCTGTGTTATTCCTCGTTTTCCCAAGTGTGTAAGTAC GCTAACCGCGTCGCCTATGAAGTCTTAGCCCAGCATAGCCCGCGTTTATCCCGTGGTTTACCTGAGCGCGAAGATAGCTT AGAAGAATCCTACTGGGAAAGATAA
Upstream 100 bases:
>100_bases TTTGTCTCGCTAGCCTAGACTCAATATTTTTAGGATGCTGCTTGGCTTGACCGCCTCGGCAGACGCCAATTAGCATGGAT GCCAGGAAAAGAGAGCCACT
Downstream 100 bases:
>100_bases GCCAGTACCTGTATTGGTATTAAGCTGACTGATTTACGCTAGGGCAATAACGGCAAACCGTTGTTGCCCTTATTTTTATG ACGTTTATCAACAATCAATC
Product: inosine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGLPKGNSTLINDEQAHRLYTEL KIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTSSKVDLNFLQPVDGPIGRCFTLISECG ERTFAISKGSMDKLTPEYIDKDVIQGSSALVLTAYLMRASDGDRITDAAMCAIEYAKAAEVPVVLTLGTRFLIEEDPQWW QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSEKRETVHTLLPGAIPEFNRYE FSRPKLKNDCETPIKVFAHISPYMGGPEKIGNTNGAGDGALSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQVCKY ANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER
Sequences:
>Translated_434_residues MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGLPKGNSTLINDEQAHRLYTEL KIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTSSKVDLNFLQPVDGPIGRCFTLISECG ERTFAISKGSMDKLTPEYIDKDVIQGSSALVLTAYLMRASDGDRITDAAMCAIEYAKAAEVPVVLTLGTRFLIEEDPQWW QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSEKRETVHTLLPGAIPEFNRYE FSRPKLKNDCETPIKVFAHISPYMGGPEKIGNTNGAGDGALSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQVCKY ANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER >Mature_434_residues MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGLPKGNSTLINDEQAHRLYTEL KIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTSSKVDLNFLQPVDGPIGRCFTLISECG ERTFAISKGSMDKLTPEYIDKDVIQGSSALVLTAYLMRASDGDRITDAAMCAIEYAKAAEVPVVLTLGTRFLIEEDPQWW QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSEKRETVHTLLPGAIPEFNRYE FSRPKLKNDCETPIKVFAHISPYMGGPEKIGNTNGAGDGALSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQVCKY ANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1786684, Length=434, Percent_Identity=69.5852534562212, Blast_Score=645, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.73 [H]
Molecular weight: Translated: 48301; Mature: 48301
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGL CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKGNSTLINDEQAHRLYTELKIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNI CCCCCCEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCHHCEEEEECCHHHHHHHHHCCC EVGSYAYRYLCNTSSKVDLNFLQPVDGPIGRCFTLISECGERTFAISKGSMDKLTPEYID CHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHH KDVIQGSSALVLTAYLMRASDGDRITDAAMCAIEYAKAAEVPVVLTLGTRFLIEEDPQWW HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHH QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSE HHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH KRETVHTLLPGAIPEFNRYEFSRPKLKNDCETPIKVFAHISPYMGGPEKIGNTNGAGDGA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCHHH LSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQVCKYANRVAYEVLAQHSPRLSRGL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC PEREDSLEESYWER CCHHHHHHHHHCCC >Mature Secondary Structure MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGL CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKGNSTLINDEQAHRLYTELKIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNI CCCCCCEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCHHCEEEEECCHHHHHHHHHCCC EVGSYAYRYLCNTSSKVDLNFLQPVDGPIGRCFTLISECGERTFAISKGSMDKLTPEYID CHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHH KDVIQGSSALVLTAYLMRASDGDRITDAAMCAIEYAKAAEVPVVLTLGTRFLIEEDPQWW HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHH QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSE HHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH KRETVHTLLPGAIPEFNRYEFSRPKLKNDCETPIKVFAHISPYMGGPEKIGNTNGAGDGA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCHHH LSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQVCKYANRVAYEVLAQHSPRLSRGL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC PEREDSLEESYWER CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]