| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is nadE
Identifier: 160875770
GI number: 160875770
Start: 3151340
End: 3152170
Strand: Reverse
Name: nadE
Synonym: Sbal195_2658
Alternate gene names: 160875770
Gene position: 3152170-3151340 (Counterclockwise)
Preceding gene: 160875771
Following gene: 160875768
Centisome position: 58.95
GC content: 48.74
Gene sequence:
>831_bases GTGAAAGCGCAAATCTTAAGAGAAATGAAGGTACTCACGGCCATAGAGCCTGAGTTCGAAGTGCAACGTCGGGTCGCGTT TATTAAAACCAAACTAAAAGAAGCGCGCAGCAAGGCATTGGTATTAGGGATCAGCGGTGGGGTGGATTCTTCTACCGCTG GGCGTTTGTGTCAGTTGGCGGTGGACAGTCTAAACCACGAAAATAGCCAAGGCGGTTACCAGTTTATCGCCGTGCGTTTA CCCTATCAGATCCAAAAAGATGAGCATGAGGCGCAATTAGCCTGTCAGTTTATTCAGCCCTCTAAATTGGTCACAGTGAA TGTGCATCAAGGTGTTGATGGAGTACACAGCGCTACCGTCGCCGCGTTAGCCGAAGCTGGATTGCCTTTGCCCGATGTGG CAAAAGTGGATTTTGTTAAGGGTAACGTTAAAGCTCGTATGCGGATGATCGCTCAATACGAACTCGCCGGACTCGTAGGT GGACTCGTCGTGGGGACAGATCACAGCGCCGAAAACATCACAGGTTTTTACACTAAGTGGGGCGATGGTGCCTGCGATTT AGCGCCTTTATTTGGTCTTAACAAGCGCCAAGTTCGCCAACTCGCCGCGTATCTTGGTGCGCCAGAGTCTTTAGTGCATA AAGCGCCAACTGCGGATCTAGAAGACAATAAACCGCTACTCGAAGATGAAGTTGCACTGGGGCTAACCTATGCGCAAATT GATGATTTCCTTGAGGGAAAAGACGTCGGTAAGGCAGTTGAAGATAAGTTGATTGGTATTTATAAGGCGACGCAGCATAA GCGTCAACCTATTCCAACTATCTACGACTAA
Upstream 100 bases:
>100_bases GCTAAGCGCTAATTTTAACTACAGGCAGTTGCGAATAAATGTTAACGTTAGTCGGGTTCAGATAGTCCAAATACAGCGAT TATTTAAGGTGGAATTTTCG
Downstream 100 bases:
>100_bases CGCTAAATCGTACTCGAATAAGCACTCGTTGGAACTCAGTTCACGAGTGCTTTTTTATGTCTTTTTCTTACTGAGTCATT GAGGTTACTGCATTTGGCAA
Product: NAD synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKAQILREMKVLTAIEPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQLAVDSLNHENSQGGYQFIAVRL PYQIQKDEHEAQLACQFIQPSKLVTVNVHQGVDGVHSATVAALAEAGLPLPDVAKVDFVKGNVKARMRMIAQYELAGLVG GLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQLAAYLGAPESLVHKAPTADLEDNKPLLEDEVALGLTYAQI DDFLEGKDVGKAVEDKLIGIYKATQHKRQPIPTIYD
Sequences:
>Translated_276_residues MKAQILREMKVLTAIEPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQLAVDSLNHENSQGGYQFIAVRL PYQIQKDEHEAQLACQFIQPSKLVTVNVHQGVDGVHSATVAALAEAGLPLPDVAKVDFVKGNVKARMRMIAQYELAGLVG GLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQLAAYLGAPESLVHKAPTADLEDNKPLLEDEVALGLTYAQI DDFLEGKDVGKAVEDKLIGIYKATQHKRQPIPTIYD >Mature_276_residues MKAQILREMKVLTAIEPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQLAVDSLNHENSQGGYQFIAVRL PYQIQKDEHEAQLACQFIQPSKLVTVNVHQGVDGVHSATVAALAEAGLPLPDVAKVDFVKGNVKARMRMIAQYELAGLVG GLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQLAAYLGAPESLVHKAPTADLEDNKPLLEDEVALGLTYAQI DDFLEGKDVGKAVEDKLIGIYKATQHKRQPIPTIYD
Specific function: This NAD Synthase Uses Nh(3) In Preference To Glutamine. [C]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD synthetase family
Homologues:
Organism=Escherichia coli, GI1788036, Length=277, Percent_Identity=51.2635379061372, Blast_Score=268, Evalue=4e-73,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NADE_SHEB2 (B8E735)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002357731.1 - ProteinModelPortal: B8E735 - SMR: B8E735 - GeneID: 7088337 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_1803 - HOGENOM: HBG351567 - OMA: KVAQATI - ProtClustDB: PRK00768 - HAMAP: MF_00193 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR022926 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00552
Pfam domain/function: PF02540 NAD_synthase
EC number: =6.3.1.5
Molecular weight: Translated: 30017; Mature: 30017
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: ACT_SITE 45-45
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQILREMKVLTAIEPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQLA CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH VDSLNHENSQGGYQFIAVRLPYQIQKDEHEAQLACQFIQPSKLVTVNVHQGVDGVHSATV HHHCCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHH AALAEAGLPLPDVAKVDFVKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKW HHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEC GDGACDLAPLFGLNKRQVRQLAAYLGAPESLVHKAPTADLEDNKPLLEDEVALGLTYAQI CCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHEEHHHHH DDFLEGKDVGKAVEDKLIGIYKATQHKRQPIPTIYD HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKAQILREMKVLTAIEPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQLA CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH VDSLNHENSQGGYQFIAVRLPYQIQKDEHEAQLACQFIQPSKLVTVNVHQGVDGVHSATV HHHCCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHH AALAEAGLPLPDVAKVDFVKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKW HHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEC GDGACDLAPLFGLNKRQVRQLAAYLGAPESLVHKAPTADLEDNKPLLEDEVALGLTYAQI CCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHEEHHHHH DDFLEGKDVGKAVEDKLIGIYKATQHKRQPIPTIYD HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA