Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160875725

Identifier: 160875725

GI number: 160875725

Start: 3098848

End: 3099207

Strand: Direct

Name: 160875725

Synonym: Sbal195_2613

Alternate gene names: NA

Gene position: 3098848-3099207 (Clockwise)

Preceding gene: 160875724

Following gene: 160875726

Centisome position: 57.95

GC content: 41.94

Gene sequence:

>360_bases
ATGTGGTGGAGAAGTCTTTGGATCCTGATAGCTTGCTGGCTATTGTGTGCCCACTTTGTACGTTATGAACAAATTAGCTT
TGCCATCCCCTTTGCAATTGCGCCCTTAGTTTTATTCTTTAACTCGGTTTACTTACTGCGTTTATTACAAACTTTATTAT
TTATGAGTGTCTTTACCGTCTGGGGCGTCACGACGATTGAAGCGATACAAATGCGTTTAGCGCAAGAAGCGCCTTGGTTA
AGATTATCTTTTATTATGACGGCGGTGATGCTATTTACCTTAGGTGCAATTATCTGTGGTAACGGTATTTTGCGGATCAG
AAAACGAAAGTCTCCTTGGGGAGATTCACCGATACGCTAG

Upstream 100 bases:

>100_bases
TTTTCTACAATTAGCAAAATGTGAACATGCCAATAGTATGGCAGTTTGTTTTTAGCTACATTGTTTTTACTATTTCAATA
CGTTAAATGGAGCTAAATAA

Downstream 100 bases:

>100_bases
CAATCCATCAGTAAAACTTTCATATTCAACAAGAAATGAGTACTTATTTTGACCACACGTTCTGCTCGGTCAGCAAAGGT
TAAGTTCAACTAAGATATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MWWRSLWILIACWLLCAHFVRYEQISFAIPFAIAPLVLFFNSVYLLRLLQTLLFMSVFTVWGVTTIEAIQMRLAQEAPWL
RLSFIMTAVMLFTLGAIICGNGILRIRKRKSPWGDSPIR

Sequences:

>Translated_119_residues
MWWRSLWILIACWLLCAHFVRYEQISFAIPFAIAPLVLFFNSVYLLRLLQTLLFMSVFTVWGVTTIEAIQMRLAQEAPWL
RLSFIMTAVMLFTLGAIICGNGILRIRKRKSPWGDSPIR
>Mature_119_residues
MWWRSLWILIACWLLCAHFVRYEQISFAIPFAIAPLVLFFNSVYLLRLLQTLLFMSVFTVWGVTTIEAIQMRLAQEAPWL
RLSFIMTAVMLFTLGAIICGNGILRIRKRKSPWGDSPIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13880; Mature: 13880

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWRSLWILIACWLLCAHFVRYEQISFAIPFAIAPLVLFFNSVYLLRLLQTLLFMSVFTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGVTTIEAIQMRLAQEAPWLRLSFIMTAVMLFTLGAIICGNGILRIRKRKSPWGDSPIR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MWWRSLWILIACWLLCAHFVRYEQISFAIPFAIAPLVLFFNSVYLLRLLQTLLFMSVFTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGVTTIEAIQMRLAQEAPWLRLSFIMTAVMLFTLGAIICGNGILRIRKRKSPWGDSPIR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA