| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875682
Identifier: 160875682
GI number: 160875682
Start: 3044937
End: 3045263
Strand: Reverse
Name: 160875682
Synonym: Sbal195_2570
Alternate gene names: NA
Gene position: 3045263-3044937 (Counterclockwise)
Preceding gene: 160875683
Following gene: 160875681
Centisome position: 56.95
GC content: 48.62
Gene sequence:
>327_bases ATGGTAGATCTCGTCGTTAATTTTGATACCTTACATCAGCTATATCGTGCCTATATGCCTTTTATTAAGCCGGCAGGATT ATTCATAGCCACCAGTGAAGGCCATTACCTTGGCCAGCCGCTGACGATTGCGTATCGCTTACCGGGCGCGACCATAACGA ATGAATTTCGCGGTGTCGTGGTATGGATCAATCCCTTAGGTGCTTCGGGCGGCCGTCCTGTAGGCATTGGCATTAAAATT GTTTCTGAGCCCGATAGCCATAAACACCACATCGAAAAATTACTGTCGCGCGAACTGGCCTCCGGCGATCTAACCTGCAC TATGTAA
Upstream 100 bases:
>100_bases AATGTGTCATAGCTTAAGTACAATGCCGAGCGTCAATTATCTGGCCTTGTGTCAAAGTTATGTCTTAGAATATAGAGAGA TAACAAATAAGTAATATGCC
Downstream 100 bases:
>100_bases GTTGGCTCGCATTATTGCTCTGGTTTGAACGTTAATTAGGTTTAAACGCTCTGATTTAAGCGTTACTCGCGTTTAACTGT TCTAGTTTTAACATTGGCCC
Product: type IV pilus biogenesis protein PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly PilZ; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein PilZ; Tfp Pilus Assembly Protein PilZ
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVDLVVNFDTLHQLYRAYMPFIKPAGLFIATSEGHYLGQPLTIAYRLPGATITNEFRGVVVWINPLGASGGRPVGIGIKI VSEPDSHKHHIEKLLSRELASGDLTCTM
Sequences:
>Translated_108_residues MVDLVVNFDTLHQLYRAYMPFIKPAGLFIATSEGHYLGQPLTIAYRLPGATITNEFRGVVVWINPLGASGGRPVGIGIKI VSEPDSHKHHIEKLLSRELASGDLTCTM >Mature_108_residues MVDLVVNFDTLHQLYRAYMPFIKPAGLFIATSEGHYLGQPLTIAYRLPGATITNEFRGVVVWINPLGASGGRPVGIGIKI VSEPDSHKHHIEKLLSRELASGDLTCTM
Specific function: Unknown
COG id: COG3215
COG function: function code NU; Tfp pilus assembly protein PilZ
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11831; Mature: 11831
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLVVNFDTLHQLYRAYMPFIKPAGLFIATSEGHYLGQPLTIAYRLPGATITNEFRGVV CEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEECCCCCEEE VWINPLGASGGRPVGIGIKIVSEPDSHKHHIEKLLSRELASGDLTCTM EEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MVDLVVNFDTLHQLYRAYMPFIKPAGLFIATSEGHYLGQPLTIAYRLPGATITNEFRGVV CEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEECCCCCEEE VWINPLGASGGRPVGIGIKIVSEPDSHKHHIEKLLSRELASGDLTCTM EEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA