| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875563
Identifier: 160875563
GI number: 160875563
Start: 2898114
End: 2898407
Strand: Reverse
Name: 160875563
Synonym: Sbal195_2451
Alternate gene names: NA
Gene position: 2898407-2898114 (Counterclockwise)
Preceding gene: 160875567
Following gene: 160875562
Centisome position: 54.2
GC content: 48.64
Gene sequence:
>294_bases ATGTTTGTTGTTTCGCTCACCTATAAAAAGCCTATTGCCGAAGTGGAGTTACATTTAGCCGCACACATTGCCTACCTTGA GCAGTATTATGCCGCAGGGACTTTTATTGCCTCGGGTCGTAAAGTGCCACGTACTGGCGGTGTCATTCTCGCTAAGGCTG AGAGTCGCGCGGCGCTAGAGGCCATTTTGCAGCAAGATCCGTTCTGCATTGCCGATGTTGCCGAGTTTGAGGTAATAGAG TTTGTGCCGACTAAAACCGCGCCCGGATTAGAGTCGTTAATTGAAGTGATTTAA
Upstream 100 bases:
>100_bases TAACTTTGCAGGAAGCTAAGTTCATTTGACACTTTAGGACCGCACTATATAGTCAGCTGGGGGAACCCTATGCCCCAAAC TTGTGAATAAGAGGATACCT
Downstream 100 bases:
>100_bases TGACCTTTTAGGCCGTCGTGGAGGCTAATATCGGCAGATTAGATTTCGTAGCTTGAGCGTAAGGTGCCTAGCGGCTTAGA TTGATACGATTGAATCCGTT
Product: YCII-like protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Related Domain-Containing Protein; GTP Cyclohydrolase II; Ycii-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related Domain Superfamily; YCII-Like Protein; YciL Domain-Containing Protein; YciI Domain-Containing Protein; Protein Conserved In Bacteria; YCII-Related Domain Family Protein
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MFVVSLTYKKPIAEVELHLAAHIAYLEQYYAAGTFIASGRKVPRTGGVILAKAESRAALEAILQQDPFCIADVAEFEVIE FVPTKTAPGLESLIEVI
Sequences:
>Translated_97_residues MFVVSLTYKKPIAEVELHLAAHIAYLEQYYAAGTFIASGRKVPRTGGVILAKAESRAALEAILQQDPFCIADVAEFEVIE FVPTKTAPGLESLIEVI >Mature_97_residues MFVVSLTYKKPIAEVELHLAAHIAYLEQYYAAGTFIASGRKVPRTGGVILAKAESRAALEAILQQDPFCIADVAEFEVIE FVPTKTAPGLESLIEVI
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10550; Mature: 10550
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVVSLTYKKPIAEVELHLAAHIAYLEQYYAAGTFIASGRKVPRTGGVILAKAESRAALE CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCHHHHHH AILQQDPFCIADVAEFEVIEFVPTKTAPGLESLIEVI HHHHCCCCEEECHHHHEEEEEECCCCCCCHHHHHHHC >Mature Secondary Structure MFVVSLTYKKPIAEVELHLAAHIAYLEQYYAAGTFIASGRKVPRTGGVILAKAESRAALE CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCHHHHHH AILQQDPFCIADVAEFEVIEFVPTKTAPGLESLIEVI HHHHCCCCEEECHHHHEEEEEECCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA