| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875562
Identifier: 160875562
GI number: 160875562
Start: 2897109
End: 2897978
Strand: Reverse
Name: 160875562
Synonym: Sbal195_2450
Alternate gene names: NA
Gene position: 2897978-2897109 (Counterclockwise)
Preceding gene: 160875563
Following gene: 160875561
Centisome position: 54.2
GC content: 45.75
Gene sequence:
>870_bases ATGGATCAAATTTGGACTGAATTACAACAGGCTCAGGTTTTTAAAACCTTTTCAGATATTGGCGAACCTGCCCATTTCTA CCACGCCAATGGTTTTCCATTAGGCGTTTATGCGCCCTTATTGGCCAAGTTGAAGCAAGAGTTTAGCCTTAATGCACTCG AGTTAAGGCCGACATGGCCTGATGCAGGTATGCCGCCTAAGCGCCGAGATTGGCAGCTTTATGCCGATGACTTGATCTTG CATATTGAGCGGCATTGCAGTGCGCCGATTGTGGGAATTGGCCATTCAATGGGAGCAACCAGCACCATTCTTGCCGCCAA CAAAAGACCCGATTTGTTTAACGCACTGATACTAATTGAACCTGCAATGGTATCGCTCCCTATCGCTTGGTTTGCTAAGT TAATGCCTAAATCGTTAATGAATCTGACCGCGCCCGCAAAAAACACCTTAAAGAAGCGCGATGTGTGGGAAACTCGGGAG CAATATATCGAATATTGCAAAATGAGTAAGCTATACAAACGCTTTGATGATGAGGCTTTTATCGCCTTAGCCCAATTTGG GATTCATCAAAACAATGATGGCCAATTCACCCTGAAGTTTCCTAAACGATGGGAAGCGCATAACTACACTCAACCGCCGA ATGTATTATCGATATTGAAGCAGATAAAGCTTCCCTGCGTCGCTATCCGGGGGAAACCGTCAGTGTTCTTTTCTGAAGCG ACCTGGCTGCGCTGGCAACAGCTAACGCCGGATACGGTATTTTTAGAAGATAAGCGATATGGACATCTGCTGCCATTAGA AGATCCATCTGCCTGCTTAAGCCTTATTCATCAAGGGCTCAGTGAACTGAATCGCAAACGGGTGAAATAA
Upstream 100 bases:
>100_bases AGATTAGATTTCGTAGCTTGAGCGTAAGGTGCCTAGCGGCTTAGATTGATACGATTGAATCCGTTGAACTATAACAGTGG GATTCGATAAGTAGGATTTG
Downstream 100 bases:
>100_bases GTGAATTTGAGATGGACTAAGAATGAAAGGGCACTCAGAAAACGGCTTAGGTTAAGAGTGCACTGACGCTAGCTAAACGC GAGCGCTACAGTTCAAGCTA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolases Or Acyltransferases; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Alpha/Beta Family; Hydrolase/Acyltransferase; Alpha/Beta Fold Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDQIWTELQQAQVFKTFSDIGEPAHFYHANGFPLGVYAPLLAKLKQEFSLNALELRPTWPDAGMPPKRRDWQLYADDLIL HIERHCSAPIVGIGHSMGATSTILAANKRPDLFNALILIEPAMVSLPIAWFAKLMPKSLMNLTAPAKNTLKKRDVWETRE QYIEYCKMSKLYKRFDDEAFIALAQFGIHQNNDGQFTLKFPKRWEAHNYTQPPNVLSILKQIKLPCVAIRGKPSVFFSEA TWLRWQQLTPDTVFLEDKRYGHLLPLEDPSACLSLIHQGLSELNRKRVK
Sequences:
>Translated_289_residues MDQIWTELQQAQVFKTFSDIGEPAHFYHANGFPLGVYAPLLAKLKQEFSLNALELRPTWPDAGMPPKRRDWQLYADDLIL HIERHCSAPIVGIGHSMGATSTILAANKRPDLFNALILIEPAMVSLPIAWFAKLMPKSLMNLTAPAKNTLKKRDVWETRE QYIEYCKMSKLYKRFDDEAFIALAQFGIHQNNDGQFTLKFPKRWEAHNYTQPPNVLSILKQIKLPCVAIRGKPSVFFSEA TWLRWQQLTPDTVFLEDKRYGHLLPLEDPSACLSLIHQGLSELNRKRVK >Mature_289_residues MDQIWTELQQAQVFKTFSDIGEPAHFYHANGFPLGVYAPLLAKLKQEFSLNALELRPTWPDAGMPPKRRDWQLYADDLIL HIERHCSAPIVGIGHSMGATSTILAANKRPDLFNALILIEPAMVSLPIAWFAKLMPKSLMNLTAPAKNTLKKRDVWETRE QYIEYCKMSKLYKRFDDEAFIALAQFGIHQNNDGQFTLKFPKRWEAHNYTQPPNVLSILKQIKLPCVAIRGKPSVFFSEA TWLRWQQLTPDTVFLEDKRYGHLLPLEDPSACLSLIHQGLSELNRKRVK
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33213; Mature: 33213
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQIWTELQQAQVFKTFSDIGEPAHFYHANGFPLGVYAPLLAKLKQEFSLNALELRPTWP CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC DAGMPPKRRDWQLYADDLILHIERHCSAPIVGIGHSMGATSTILAANKRPDLFNALILIE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCC PAMVSLPIAWFAKLMPKSLMNLTAPAKNTLKKRDVWETREQYIEYCKMSKLYKRFDDEAF CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IALAQFGIHQNNDGQFTLKFPKRWEAHNYTQPPNVLSILKQIKLPCVAIRGKPSVFFSEA HHHHHHCCEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEECCC TWLRWQQLTPDTVFLEDKRYGHLLPLEDPSACLSLIHQGLSELNRKRVK HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDQIWTELQQAQVFKTFSDIGEPAHFYHANGFPLGVYAPLLAKLKQEFSLNALELRPTWP CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC DAGMPPKRRDWQLYADDLILHIERHCSAPIVGIGHSMGATSTILAANKRPDLFNALILIE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCC PAMVSLPIAWFAKLMPKSLMNLTAPAKNTLKKRDVWETREQYIEYCKMSKLYKRFDDEAF CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IALAQFGIHQNNDGQFTLKFPKRWEAHNYTQPPNVLSILKQIKLPCVAIRGKPSVFFSEA HHHHHHCCEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEECCC TWLRWQQLTPDTVFLEDKRYGHLLPLEDPSACLSLIHQGLSELNRKRVK HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA