| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is thiE [H]
Identifier: 160875550
GI number: 160875550
Start: 2881838
End: 2883736
Strand: Reverse
Name: thiE [H]
Synonym: Sbal195_2438
Alternate gene names: 160875550
Gene position: 2883736-2881838 (Counterclockwise)
Preceding gene: 160875551
Following gene: 160875549
Centisome position: 53.93
GC content: 48.71
Gene sequence:
>1899_bases ATGAGTACCGAGCGTCCCGCGTTTGTTTGGACCATAGCTGGTTCAGACAGTGGCGGTGGTGCCGGTATTCAGGCGGACTT AGCGACAATTCAAGATTTGGGCTGTCACGGTTGCAGTGTGGTCACCACAGTGACGGCGCAAAGTTCTGTGGCGGTCACTT TAGTCGAGCCCGTATCAGCGGCGATGTTAATGGCTCAGCTGACGACTTTACTTTCCGACTTGCCACCCAAAGCAATTAAA ATCGGCTTACTGGCAGATCAAACTCAAGTGGCATTGCTGGCAGATTGGATCGCGAGTTTTAAAATCCACTATCCATCTGT GCCTGTGATTGTCGATCCTGTGATGGTCGCCAGTTGTGGCGATGCATTAGCAGTAGATAACTGTCAGGATATAAAAAGTG CGGCCAAATCAGCCTTAGATTTTAGGCCTTTCAAAGGTTTAATCGAACTTATCACGCCCAATGTGCTTGAACTTGGGCGA TTAACTCACAGTGATGTTTCAACGAAAGCGCAATTCGCTGCCGCGGCACTGGCTTTATCCCAGAGTCTTGATTGCAGTGT GCTCGCCAAAGGGGGCGATGTAAGCTTTGGCAGCACTGACATTCTTGAAAATACTCATGCTAAAACTCACGATAATACTT ATGCTCAAACTCAGGCTAACGCTCACAATAGCAACGGCTGGGATCTTGAGCTTGCCGAGGATTATCTGGTTTGCCATCAA GTACGCGCGAGCTCTAAACTGCATCAAAATGGGCGTTTCTGGTTAGCCAGCCAGCGGGTTAATACCCGTCATAACCATGG TAGCGGCTGTACTTTGTCATCGGCCATTGCCGCCGTGTTAGCGCAGGGTTTTGTATTACAAGATGCGGTGGTGGTTGCCA AAGCCTATGTGAGTCAAGGCTTAAGCGCGGCGATTGGCTTAGGACAAGGTCCAGGGCCGTTGGCCCGTACGGGTTGGCCT AATAACTTGTCCCGCTATGCCAAGATAAATCTGTGTGATGGCAATTTTATTCGTCATCACCTCAATCGACATCTTGATGT TAGAAGTGATTTAGTTGCAACAGTTTTATCCGCAACAGATCAGGCAACCGCTCAGGTAAGAATAGCCTCGACGCCACCTC AAAATATTTTATCCCACGGTTTTAAAGTGCTCGATGCCGAGCTTGGTGTTTATCCCGTGGTGAGTGACTTAACCATGCTG GAAAGTTTATTAGCGGCAGGCGTTAAAACTGTGCAGTTACGGATAAAAACCGACATCAGCGAGTTAACTACTACCACCGC GCCAGCCGAATCTGATTTAGGCAAGTCTGCGCTAGGTAGATGTGAGTCAGGCGAACCTGAGTTAATTGGCTCCGAATTAG AAGCACAAATTCAAACAGCCATTGCCTTAGGCAAGCATTTTAATGCACAGCTTTTTATTAATGATCACTGGAAGTTAGCG ATAAAATACCATGCCTTCGGGGTACATTTAGGCCAAGAAGATCTCGCCGTTACTGACTTAGCGGCCATTCAAGCCGCGGG GCTCGCGCTAGGAATATCGAGCCACAGTTATTTCGAGTTGCTATTGGCGCACCAATACTCGCCATCCTACATAGCGCTTG GGCATATATTCCCAACCACGACGAAGCAAATGCCTTCGGCGCCCCAAGGGCTCGCAAAACTTAAACACTATGTGGCGTTA CTCCAAGGCCATTATCCCTTGGTCGCCATTGGCGGTATTGACTTAACAAATCTGGCAAAGGTGAAAGCAACAGGGGTGGG CAATATTGCTGTGGTGCGCGCAATAACGAAAGCTAAGGAGCCAGTCGCAGCGTTTGCAGAGCTGAGCCAAGCTTGGGAGC AATGTAGCTTGTGTGAAGAACTGGCTGTAAAGCAAGAGTTGGATGCAAAGCATGAGTAA
Upstream 100 bases:
>100_bases TTGCTGCTTCGGGCGCCGAGATCTATCACGTGAAAGACAAGCTTGTCGCCGAAGCTGAGGAAGCCTAATTATGCAGGGTA TTCATGGGGGGAAATTGCCC
Downstream 100 bases:
>100_bases AAAAACACCTCTTTCTCACGCAGAGGTTCTTTGCGGTCATATACACAGCGACAATGAACACTGCGGCCATGCACTCAGTG ATGCCGATTTCATCCGTTAT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MSTERPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSAAMLMAQLTTLLSDLPPKAIK IGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCGDALAVDNCQDIKSAAKSALDFRPFKGLIELITPNVLELGR LTHSDVSTKAQFAAAALALSQSLDCSVLAKGGDVSFGSTDILENTHAKTHDNTYAQTQANAHNSNGWDLELAEDYLVCHQ VRASSKLHQNGRFWLASQRVNTRHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQGLSAAIGLGQGPGPLARTGWP NNLSRYAKINLCDGNFIRHHLNRHLDVRSDLVATVLSATDQATAQVRIASTPPQNILSHGFKVLDAELGVYPVVSDLTML ESLLAAGVKTVQLRIKTDISELTTTTAPAESDLGKSALGRCESGEPELIGSELEAQIQTAIALGKHFNAQLFINDHWKLA IKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTTTKQMPSAPQGLAKLKHYVAL LQGHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKEPVAAFAELSQAWEQCSLCEELAVKQELDAKHE
Sequences:
>Translated_632_residues MSTERPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSAAMLMAQLTTLLSDLPPKAIK IGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCGDALAVDNCQDIKSAAKSALDFRPFKGLIELITPNVLELGR LTHSDVSTKAQFAAAALALSQSLDCSVLAKGGDVSFGSTDILENTHAKTHDNTYAQTQANAHNSNGWDLELAEDYLVCHQ VRASSKLHQNGRFWLASQRVNTRHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQGLSAAIGLGQGPGPLARTGWP NNLSRYAKINLCDGNFIRHHLNRHLDVRSDLVATVLSATDQATAQVRIASTPPQNILSHGFKVLDAELGVYPVVSDLTML ESLLAAGVKTVQLRIKTDISELTTTTAPAESDLGKSALGRCESGEPELIGSELEAQIQTAIALGKHFNAQLFINDHWKLA IKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTTTKQMPSAPQGLAKLKHYVAL LQGHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKEPVAAFAELSQAWEQCSLCEELAVKQELDAKHE >Mature_631_residues STERPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSAAMLMAQLTTLLSDLPPKAIKI GLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCGDALAVDNCQDIKSAAKSALDFRPFKGLIELITPNVLELGRL THSDVSTKAQFAAAALALSQSLDCSVLAKGGDVSFGSTDILENTHAKTHDNTYAQTQANAHNSNGWDLELAEDYLVCHQV RASSKLHQNGRFWLASQRVNTRHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQGLSAAIGLGQGPGPLARTGWPN NLSRYAKINLCDGNFIRHHLNRHLDVRSDLVATVLSATDQATAQVRIASTPPQNILSHGFKVLDAELGVYPVVSDLTMLE SLLAAGVKTVQLRIKTDISELTTTTAPAESDLGKSALGRCESGEPELIGSELEAQIQTAIALGKHFNAQLFINDHWKLAI KYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTTTKQMPSAPQGLAKLKHYVALL QGHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKEPVAAFAELSQAWEQCSLCEELAVKQELDAKHE
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=220, Percent_Identity=51.8181818181818, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1788420, Length=308, Percent_Identity=30.1948051948052, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6325378, Length=306, Percent_Identity=28.1045751633987, Blast_Score=85, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324997, Length=202, Percent_Identity=29.2079207920792, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324517, Length=209, Percent_Identity=29.1866028708134, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 66916; Mature: 66785
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTERPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSA CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECHHHH AMLMAQLTTLLSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCG HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCEEECCCCCEEECCHHHHCCC DALAVDNCQDIKSAAKSALDFRPFKGLIELITPNVLELGRLTHSDVSTKAQFAAAALALS CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHH QSLDCSVLAKGGDVSFGSTDILENTHAKTHDNTYAQTQANAHNSNGWDLELAEDYLVCHQ CCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHH VRASSKLHQNGRFWLASQRVNTRHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQG HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC LSAAIGLGQGPGPLARTGWPNNLSRYAKINLCDGNFIRHHLNRHLDVRSDLVATVLSATD CHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC QATAQVRIASTPPQNILSHGFKVLDAELGVYPVVSDLTMLESLLAAGVKTVQLRIKTDIS CCEEEEEEECCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHH ELTTTTAPAESDLGKSALGRCESGEPELIGSELEAQIQTAIALGKHFNAQLFINDHWKLA HHHCCCCCCHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEE IKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTT EEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCC TKQMPSAPQGLAKLKHYVALLQGHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKE CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHEEEECCCCCHHHHHHHHHCCC PVAAFAELSQAWEQCSLCEELAVKQELDAKHE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STERPAFVWTIAGSDSGGGAGIQADLATIQDLGCHGCSVVTTVTAQSSVAVTLVEPVSA CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECHHHH AMLMAQLTTLLSDLPPKAIKIGLLADQTQVALLADWIASFKIHYPSVPVIVDPVMVASCG HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCEEECCCCCEEECCHHHHCCC DALAVDNCQDIKSAAKSALDFRPFKGLIELITPNVLELGRLTHSDVSTKAQFAAAALALS CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHH QSLDCSVLAKGGDVSFGSTDILENTHAKTHDNTYAQTQANAHNSNGWDLELAEDYLVCHQ CCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHH VRASSKLHQNGRFWLASQRVNTRHNHGSGCTLSSAIAAVLAQGFVLQDAVVVAKAYVSQG HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC LSAAIGLGQGPGPLARTGWPNNLSRYAKINLCDGNFIRHHLNRHLDVRSDLVATVLSATD CHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC QATAQVRIASTPPQNILSHGFKVLDAELGVYPVVSDLTMLESLLAAGVKTVQLRIKTDIS CCEEEEEEECCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHH ELTTTTAPAESDLGKSALGRCESGEPELIGSELEAQIQTAIALGKHFNAQLFINDHWKLA HHHCCCCCCHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEE IKYHAFGVHLGQEDLAVTDLAAIQAAGLALGISSHSYFELLLAHQYSPSYIALGHIFPTT EEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCC TKQMPSAPQGLAKLKHYVALLQGHYPLVAIGGIDLTNLAKVKATGVGNIAVVRAITKAKE CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHEEEECCCCCHHHHHHHHHCCC PVAAFAELSQAWEQCSLCEELAVKQELDAKHE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA